DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl4 and Fbl6

DIOPT Version :9

Sequence 1:NP_572951.1 Gene:Fbxl4 / 32378 FlyBaseID:FBgn0030555 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_610665.2 Gene:Fbl6 / 36201 FlyBaseID:FBgn0033609 Length:720 Species:Drosophila melanogaster


Alignment Length:871 Identity:175/871 - (20%)
Similarity:270/871 - (30%) Gaps:364/871 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLLAYGEPAESSETDSPAAEAEPDVLVDF--TAMLQRQRQNGDYGGWFGCDSKMQTTQSDQGYYL 64
            ||.:..|..:.|:.|....:||.....|.  |||   :.:..|.||       .|..||:     
  Fly     4 SLSSQVEETKVSDDDGVKEKAEVSTAKDSAETAM---EVEADDTGG-------QQPEQSE----- 53

  Fly    65 EQYVLGVLDFSSQYGIDYSISYTAANVIGRPTKFPAYGDYPETFPMRTYGDWWQRAPSATREIQP 129
                  :||......:|.: :.|.:.    |::.|     |:...:.|       |.|.:..:.|
  Fly    54 ------LLDKEKSATVDIN-TLTPST----PSQTP-----PQLLAVET-------ATSGSTAVIP 95

  Fly   130 QNL---PKLETHDYVVVYFEEFVVPTEVAIFETFNPGAVVRIWAYGLTKNWTCLWEATESDLSRP 191
            :|:   ||.||..      :|    |..|...:.:|.                      ||..|.
  Fly    96 ENILSPPKSETQT------DE----TNTATSTSCSPA----------------------SDGQRS 128

  Fly   192 PPLDSRRFAP----------------------------SLKKTTML------------TKTLRID 216
            |..|.:..||                            |.|||:..            ||.|.: 
  Fly   129 PAADQQSSAPPPQVQAQATPAPVNGSVPKSGKPLSTALSGKKTSKAATTSPRASRCRKTKALPM- 192

  Fly   217 FNHSRLNYYTEID----AIMLCGRTVTKTQNLLAKQQITQHSRTLVSPPPDAIGSTS-------- 269
                   |.:||.    .|.||          :.|....:.:...|:.||.|:.:.:        
  Fly   193 -------YESEISDNKMGIRLC----------IKKSDAGEGAPAGVTSPPVAVPAATKTVRKRVR 240

  Fly   270 --------------------GDGSGGSISHKLRTLKFQPNCGEDGATKLHEFINNDLSQFLADNC 314
                                |.||||.     :.:...|:..|                      
  Fly   241 KPKQQDSDEAEYEPRKKKGGGGGSGGE-----KKVSTSPDAAE---------------------- 278

  Fly   315 VDGEAAAPQICLTDLPFEILLRILSY-LD----LKSLFRVGHVSRTFYDISRHPLLY-------- 366
            ..|:.....:....||.|:|.||..: :|    |.:|||:|.|...:..:|..|.|:        
  Fly   279 AAGDPVEQSVWAQKLPEEVLFRIFEHAVDTQGCLPTLFRLGRVCSLWRQVSLRPTLWRTMDLTTW 343

  Fly   367 ------AEISLKPY---------------WDVASSELLCTLARRAT------------------- 391
                  .|:.||.:               |.:  |::.|.||:.::                   
  Fly   344 VKEKYRTELKLKWFVDNRCSACTDLNVSNWKI--SDINCFLAKLSSGCPNLAGITLSGWKGFTSD 406

  Fly   392 ----------MLRKLDLSWCGGFGNVSPT-----EFKKFLTQRGDNLTHLRLNSCKFLNASCIEN 441
                      .|::||||......|.|.:     .....|...|..||||.|...:.  |...:.
  Fly   407 HLTYLVDNMHKLQRLDLSSINVEMNASKSAVGVNSLCNALQTMGSRLTHLYLAHNRL--AGIPQI 469

  Fly   442 VGIV---CDNLIELSLRNCATEP--------PLLNFSC----------------LANLK------ 473
            |||:   |.||..|.|.|..|:.        ..|...|                .|:::      
  Fly   470 VGILSTHCPNLTLLDLSNVTTQATSHGVLHIEKLQRGCQKLKVLRVTNSHITPSTASMQEIMDSP 534

  Fly   474 ---NLERLDLFQTYFETEL-----LLSMLEGNRKLKHLNLAFCGVSVNMDNVAAHLATYNTQLIS 530
               .||.|.:.....|:.:     |..:|:.:.|||.|::..|            ....:..||.
  Fly   535 GFPELEELSVAALTDESRIISDDHLQRILKSSSKLKLLDVRNC------------TRLTHESLIR 587

  Fly   531 LDLW--KAHFLS--------SRGLQSLAR--LHQLEELDLGWCMREASLGDGLFQLLSNCPKLKK 583
            |..|  |..|||        ..||:.:|.  .|.|.||||.|.        .:.|.:.|      
  Fly   588 LPAWDIKHLFLSGCSVTRDMGSGLELIASKWAHSLIELDLAWA--------NMQQPIDN------ 638

  Fly   584 LFLSAVRGTTERDLMHIAALGKN--LEQLDLMGILNITHERVYDILVNCPKLQLLDLSFCDNI-- 644
                |:|...|:        |::  |..|:|.| .:::.|.|.:||.||..:..::|:.|..:  
  Fly   639 ----ALRALAEK--------GRDSPLAHLNLCG-SSVSDEAVKEILTNCQNMSSINLASCRGLPR 690

  Fly   645 ----MDRDFDLLAEWSRQFKVDIKSS 666
                :.:....|.|......|.:|||
  Fly   691 GVKRLMQGPQELGELREVLGVQLKSS 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl4NP_572951.1 F-box-like 326..372 CDD:289689 17/64 (27%)
leucine-rich repeat 393..422 CDD:275381 9/33 (27%)
leucine-rich repeat 423..442 CDD:275381 6/18 (33%)
LRR_RI 437..>641 CDD:238064 59/258 (23%)
leucine-rich repeat 449..474 CDD:275381 8/57 (14%)
leucine-rich repeat 475..499 CDD:275381 6/28 (21%)
leucine-rich repeat 500..527 CDD:275381 4/26 (15%)
leucine-rich repeat 528..552 CDD:275381 11/35 (31%)
AMN1 552..>660 CDD:187754 26/115 (23%)
leucine-rich repeat 553..580 CDD:275381 8/26 (31%)
leucine-rich repeat 581..606 CDD:275381 4/24 (17%)
leucine-rich repeat 607..632 CDD:275381 10/24 (42%)
leucine-rich repeat 633..652 CDD:275381 2/24 (8%)
Fbl6NP_610665.2 F-box-like 293..341 CDD:289689 16/47 (34%)
leucine-rich repeat 365..391 CDD:275381 5/27 (19%)
leucine-rich repeat 392..417 CDD:275381 0/24 (0%)
leucine-rich repeat 418..445 CDD:275381 7/26 (27%)
leucine-rich repeat 453..471 CDD:275381 6/19 (32%)
leucine-rich repeat 480..509 CDD:275381 7/28 (25%)
leucine-rich repeat 510..538 CDD:275381 1/27 (4%)
leucine-rich repeat 539..579 CDD:275381 11/51 (22%)
leucine-rich repeat 580..621 CDD:275381 11/40 (28%)
leucine-rich repeat 622..649 CDD:275381 12/52 (23%)
leucine-rich repeat 652..676 CDD:275381 10/24 (42%)
leucine-rich repeat 677..698 CDD:275381 2/20 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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