Sequence 1: | NP_572951.1 | Gene: | Fbxl4 / 32378 | FlyBaseID: | FBgn0030555 | Length: | 669 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006230338.1 | Gene: | Fbxl19 / 308999 | RGDID: | 1310989 | Length: | 739 | Species: | Rattus norvegicus |
Alignment Length: | 300 | Identity: | 71/300 - (23%) |
---|---|---|---|
Similarity: | 106/300 - (35%) | Gaps: | 70/300 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 329 LPFEILLRILSYLDLKSLFRVGHVSRTF------------YDISRHPLLYAEISLKPYWDVASSE 381
Fly 382 LLCTLARRATMLRKLDLSWCGGFGNVSPTEFKKFLTQRGDNLTHLRLNSCKFLNASCIENVGIVC 446
Fly 447 DNLIEL---------SLRNCATEPPLL---NFSCLANLKNLERLDLFQTYFETELLLSMLEGNRK 499
Fly 500 LKHLNLAFCGVSVNMDNVAAHLATYNTQLISLDLWKAHFLSSRGLQSLARLHQLEELDLGWCMRE 564
Fly 565 ASLGDGLFQLLSNCPKLKKLFLSAVRGTTERDLMHIAALG 604 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fbxl4 | NP_572951.1 | F-box-like | 326..372 | CDD:289689 | 13/54 (24%) |
leucine-rich repeat | 393..422 | CDD:275381 | 11/28 (39%) | ||
leucine-rich repeat | 423..442 | CDD:275381 | 6/18 (33%) | ||
LRR_RI | 437..>641 | CDD:238064 | 36/179 (20%) | ||
leucine-rich repeat | 449..474 | CDD:275381 | 7/36 (19%) | ||
leucine-rich repeat | 475..499 | CDD:275381 | 4/23 (17%) | ||
leucine-rich repeat | 500..527 | CDD:275381 | 7/26 (27%) | ||
leucine-rich repeat | 528..552 | CDD:275381 | 0/23 (0%) | ||
AMN1 | 552..>660 | CDD:187754 | 16/52 (31%) | ||
leucine-rich repeat | 553..580 | CDD:275381 | 9/26 (35%) | ||
leucine-rich repeat | 581..606 | CDD:275381 | 6/23 (26%) | ||
leucine-rich repeat | 607..632 | CDD:275381 | |||
leucine-rich repeat | 633..652 | CDD:275381 | |||
Fbxl19 | XP_006230338.1 | zf-CXXC | <95..122 | CDD:251032 | |
PHD_FXL19 | 132..193 | CDD:277115 | |||
F-box-like | 469..512 | CDD:289689 | 10/42 (24%) | ||
AMN1 | 511..710 | CDD:187754 | 58/244 (24%) | ||
leucine-rich repeat | 531..554 | CDD:275381 | 11/27 (41%) | ||
leucine-rich repeat | 555..578 | CDD:275381 | 6/22 (27%) | ||
leucine-rich repeat | 616..643 | CDD:275381 | 5/26 (19%) | ||
leucine-rich repeat | 644..670 | CDD:275381 | 8/28 (29%) | ||
leucine-rich repeat | 674..698 | CDD:275381 | 9/26 (35%) | ||
leucine-rich repeat | 699..723 | CDD:275381 | 6/23 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |