Sequence 1: | NP_572951.1 | Gene: | Fbxl4 / 32378 | FlyBaseID: | FBgn0030555 | Length: | 669 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038945396.1 | Gene: | Kdm2b / 304495 | RGDID: | 1310217 | Length: | 1350 | Species: | Rattus norvegicus |
Alignment Length: | 557 | Identity: | 106/557 - (19%) |
---|---|---|---|
Similarity: | 175/557 - (31%) | Gaps: | 216/557 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 185 ESDLSRPPPL-----DSRRFAPSL-------------KKTTM----------LTKTLRIDFNHSR 221
Fly 222 LNYYTEIDAIMLCGRTVTKTQNLLA------------------KQQIT----------------- 251
Fly 252 --QHS---------RTLVSPPPDAIGSTSGDGSGGSISHKLRTLKFQPNCG----EDGATK-LHE 300
Fly 301 FINNDLSQFLADNCVDGEAAAPQICLTDLPFEILLRILSYLDLKSLFRVGHVSRTFYDISRHPLL 365
Fly 366 YAEISLKPYWDVASSELLCTLARRATMLRKLDLSWCGGFGNVSPTEFKKFLTQRGDNLTHLRLNS 430
Fly 431 CKFLNASCIENVGIVCDNLIELSLRNCATEPPL---LNFSCLANLKNLERLDLFQTYFETELLLS 492
Fly 493 MLEGNRKLKHLNLAFCGVSVNMDNVAAHLATYNTQLISLDLWKAHFLSSRGLQSLARLHQLEELD 557
Fly 558 LGWC--MREASLGDGLFQLLSNCPKLKKLFLSAVRGTTERDLMHIAALGKNLEQLDLMGILNITH 620
Fly 621 ERVYDILVNCPKLQLLDLSFCDNIMDRDFD-LLAEWS 656 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fbxl4 | NP_572951.1 | F-box-like | 326..372 | CDD:289689 | 10/45 (22%) |
leucine-rich repeat | 393..422 | CDD:275381 | 9/28 (32%) | ||
leucine-rich repeat | 423..442 | CDD:275381 | 5/18 (28%) | ||
LRR_RI | 437..>641 | CDD:238064 | 39/208 (19%) | ||
leucine-rich repeat | 449..474 | CDD:275381 | 5/27 (19%) | ||
leucine-rich repeat | 475..499 | CDD:275381 | 3/23 (13%) | ||
leucine-rich repeat | 500..527 | CDD:275381 | 4/26 (15%) | ||
leucine-rich repeat | 528..552 | CDD:275381 | 6/23 (26%) | ||
AMN1 | 552..>660 | CDD:187754 | 21/108 (19%) | ||
leucine-rich repeat | 553..580 | CDD:275381 | 3/28 (11%) | ||
leucine-rich repeat | 581..606 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 607..632 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 633..652 | CDD:275381 | 3/19 (16%) | ||
Kdm2b | XP_038945396.1 | JmjC | 151..226 | CDD:214721 | |
cupin_RmlC-like | 198..304 | CDD:424065 | |||
JHD | 303..>338 | CDD:407680 | |||
CTD_KDM2B | 476..584 | CDD:412026 | |||
zf-CXXC | <626..662 | CDD:366873 | |||
PHD_KDM2B | 672..733 | CDD:277114 | |||
PTZ00449 | <731..967 | CDD:185628 | 13/58 (22%) | ||
F-box-like | 1082..1120 | CDD:403981 | 9/37 (24%) | ||
leucine-rich repeat | 1116..1140 | CDD:275381 | 5/24 (21%) | ||
AMN1 | 1132..1321 | CDD:187754 | 56/266 (21%) | ||
leucine-rich repeat | 1141..1164 | CDD:275381 | 9/29 (31%) | ||
leucine-rich repeat | 1165..1188 | CDD:275381 | 6/39 (15%) | ||
leucine-rich repeat | 1189..1228 | CDD:275381 | 8/40 (20%) | ||
leucine-rich repeat | 1229..1253 | CDD:275381 | 7/42 (17%) | ||
leucine-rich repeat | 1254..1283 | CDD:275381 | 14/60 (23%) | ||
leucine-rich repeat | 1284..1308 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 1309..1333 | CDD:275381 | 5/23 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |