DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl4 and rhp7

DIOPT Version :10

Sequence 1:NP_572951.1 Gene:Fbxl4 / 32378 FlyBaseID:FBgn0030555 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_587702.1 Gene:rhp7 / 2539094 PomBaseID:SPCC330.02 Length:563 Species:Schizosaccharomyces pombe


Alignment Length:406 Identity:95/406 - (23%)
Similarity:153/406 - (37%) Gaps:126/406 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 VDGEAAAPQICLTDLPFEILLRILSYLDLKSLFRVGHV-----------SRTFYDISRHPLLY-A 367
            :|.|.:.|:  |.||...::...::  |:::...:|.|           :|:..|.:....|. .
pombe   182 MDEEISVPK--LQDLCIRVIAEYIN--DIEAFGDIGQVNMDKISQIISKNRSLNDTTVKLFLSGG 242

  Fly   368 EISLKPYWDVA--SSELLCTLARRATMLRKLDLSWCG-----------------------GFGNV 407
            :..||.| |.:  :::.|..:|:....|:.|.|::||                       |...|
pombe   243 QTELKLY-DCSKITADSLFQIAQYCPNLQTLHLTYCGQMQDQVLHFYADHLTELTDVSFQGAFLV 306

  Fly   408 SPTEFKKFLTQRGDNLTHLRLNSCKFLNASCIENVGIVCDNLIELSL-----------------R 455
            |.:|:..|..:||..|..|.|.....::.|.|..:...|.|||.|:|                 |
pombe   307 SSSEWINFFKKRGSKLISLELTDTARIHVSVINAIVDCCPNLISLNLSRIFYLDDECVRLLAGCR 371

  Fly   456 NCAT---EPP--LLNFSCLANLKN-----LERLDLFQTYFETELLLSMLEGN--RKLKHLNLAFC 508
            |..:   |.|  ::|...:.::.|     |..|.|......|:.:|....|.  .:||||||:  
pombe   372 NLVSLKIESPGGIINDGSILDVLNQIGSGLHTLSLSGCTKLTDEVLKQGIGPCCGRLKHLNLS-- 434

  Fly   509 GVSVNMDNVAAHLATYNTQLISLDLWKAHFLSSRGLQSLARLHQLEELDLGWCMREASLGDGLFQ 573
            |:.:..|:.|:         |....||        :||     .||.|.|..|:   ||||    
pombe   435 GLELLTDDEAS---------IVFGEWK--------IQS-----GLETLSLRRCL---SLGD---- 470

  Fly   574 LLSNCPKLKKLFLSAVRGTTERDLMHIAALGKNLEQLDLMGILNITHERV-YDILVNCPKLQLLD 637
                         ..||..       :...|..|..|||.|:..:|.|.: |.:....|.|:.||
pombe   471 -------------KTVRAV-------LVNSGHTLRTLDLNGMSFVTDEALQYIVNFPLPMLKALD 515

  Fly   638 LSFCDNIMDR---DFD 650
            :|:...:.|:   ||:
pombe   516 VSWIRGMNDKLVCDFE 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl4NP_572951.1 F-box-like 326..370 CDD:463757 9/55 (16%)
leucine-rich repeat 393..422 CDD:275381 12/51 (24%)
leucine-rich repeat 423..442 CDD:275381 5/18 (28%)
LRR <427..>639 CDD:443914 59/241 (24%)
leucine-rich repeat 449..474 CDD:275381 9/46 (20%)
leucine-rich repeat 475..499 CDD:275381 6/25 (24%)
leucine-rich repeat 500..527 CDD:275381 9/26 (35%)
leucine-rich repeat 528..552 CDD:275381 5/23 (22%)
leucine-rich repeat 553..580 CDD:275381 9/26 (35%)
leucine-rich repeat 581..606 CDD:275381 3/24 (13%)
leucine-rich repeat 607..632 CDD:275381 8/25 (32%)
leucine-rich repeat 633..652 CDD:275381 7/21 (33%)
rhp7NP_587702.1 AMN1 210..452 CDD:187754 56/253 (22%)
leucine-rich repeat 244..262 CDD:275381 5/18 (28%)
leucine-rich repeat 269..321 CDD:275381 12/51 (24%)
leucine-rich repeat 322..347 CDD:275381 6/24 (25%)
leucine-rich repeat 348..372 CDD:275381 4/23 (17%)
leucine-rich repeat 373..399 CDD:275381 4/25 (16%)
leucine-rich repeat 401..427 CDD:275381 6/25 (24%)
leucine-rich repeat 428..456 CDD:275381 14/51 (27%)
leucine-rich repeat 457..483 CDD:275381 12/52 (23%)
leucine-rich repeat 511..536 CDD:275381 7/21 (33%)

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