DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl4 and fbxl13

DIOPT Version :9

Sequence 1:NP_572951.1 Gene:Fbxl4 / 32378 FlyBaseID:FBgn0030555 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_017209779.1 Gene:fbxl13 / 101883454 ZFINID:ZDB-GENE-140106-120 Length:796 Species:Danio rerio


Alignment Length:728 Identity:148/728 - (20%)
Similarity:246/728 - (33%) Gaps:239/728 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DQGYYLEQYVLGVL---DFSSQYGI----DYSISYTAANVIGRPTKFP------------AYGDY 104
            |..:::|:.:|.:|   ||...:..    |..||..|..::.....:|            ||..|
Zfish    38 DPLHFMEEKILSILQDQDFEIVWHTFIDKDKQISSLAGGIVNYIFGYPEDSLNLSHLLEKAYTCY 102

  Fly   105 PETFPMRTYGDW----WQRAPSATREIQPQNLPKLETHDYVVVYFEEFVVPTEVAIFETFNPGAV 165
            ........:..|    ||:...|.|.::     ::|                |..::.|      
Zfish   103 HTNLTKMCFTGWKSYIWQKKMKAARLLE-----RME----------------EAEMYHT------ 140

  Fly   166 VRIWAYGLTKNWTCLWEATESDLSRPPPLDSRRFAPSLKKTTMLTKTLRIDFNHSRLNYYTEIDA 230
                                          .||.     |...:..|..:.|...|..     ||
Zfish   141 ------------------------------QRRI-----KLAFIKWTAWVQFQKQRWK-----DA 165

  Fly   231 IMLCGRTVTKTQNLLAKQQITQHSRTLVSPPPDAIGSTSGDGSGGSISHKLRTLKFQPNCGEDGA 295
                       :..|.|.|.:.|.|.:::.....:....            ||.::......|  
Zfish   166 -----------ERKLQKVQESVHCRKIITAWRHVVQDAK------------RTKEYFKKLERD-- 205

  Fly   296 TKLHEFINNDLSQFLADNCVDGEAAAPQICLTDLPFEILLRILSYLDLKSLFRVGHVSRTFYDIS 360
              :.|..|:.:.|      .||     |..|:.||..:.|:|...|.::.|.:...|.:::..|:
Zfish   206 --MKESQNSGIPQ------GDG-----QDNLSLLPNRLFLKIFQSLGVRDLLKCAQVCQSWKAIT 257

  Fly   361 RHPLLYAEISLKPYWDVASSELLCTLARRATMLRK---LDLSWCG-------GFGNVSPTEF--- 412
            :...|:.||...|    .||.:...:..|...|.:   :.::.||       .|..:|...|   
Zfish   258 QISSLWTEIDFSP----ESSWITDQMVERILRLHRVYVISVNLCGCNMVQRLSFRRISTFTFIYQ 318

  Fly   413 --------------KKFLTQRGD--NLTHLRLNSCKFLNASCIENVGIV---CDNLIELSLRNC- 457
                          :.....:|.  ||..|.|:.|..:|.   ||:.::   |.:|:.|:|. | 
Zfish   319 TTAFIFCFVNLIKIQNTFVFKGQCRNLQELDLSECPTVND---ENMKMILEGCQSLLSLNLA-CT 379

  Fly   458 ----ATEPPLLNFSCLANLKNLERLDL-FQTYFETELL--LSMLEGNRKLKHLNLAFCGVSVNMD 515
                ||...|.:..|:.    |..|:| :..:|..:.|  |:...|.|:|:||||:.|. .:.:|
Zfish   380 HIANATIKVLASRCCVM----LRSLNLAYCIHFSDKGLQYLTTGTGCRRLRHLNLSGCS-QITVD 439

  Fly   516 NVAAHLATYNT--QLISLDL---------------------------------WKA--------- 536
            ...:...|.|:  |::..||                                 :||         
Zfish   440 GFTSVAETCNSLQQIVLNDLPTLTDICVQVLVSRCRMLTVISLLESLNLSDVAFKAVAEVIDLTK 504

  Fly   537 ------HFLSSRGLQSLAR-LHQLEELDLGWCMREASLGDGLFQLLSNCPKLKKLFLSAVRGTTE 594
                  ..::...:::|.| ..:|.||.|..|.|   :.|..|:.|.|..||..|.:|.....|:
Zfish   505 ILIEGNDVITDSSVKALCRSCLKLSELHLSCCPR---VTDACFKTLGNLTKLCNLNISGCFKVTD 566

  Fly   595 RDLMHIA---ALGKNLEQLDLMGILNITHERVYDILVNCPKLQLLDLSFCDNIMDRDFDLLAEWS 656
            ..|.:|.   :.|: |.:|||...|.||...:..|...|..|..|.|.||:|:.|..|:.|.:.|
Zfish   567 MGLHYITEGPSAGQ-LRELDLSYCLKITDLSLRRISQKCISLTNLALCFCENLTDNGFECLDKCS 630

  Fly   657 RQFKVDIKSSRRH 669
            ....:||...:.|
Zfish   631 SLISLDISGCKIH 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl4NP_572951.1 F-box-like 326..372 CDD:289689 12/45 (27%)
leucine-rich repeat 393..422 CDD:275381 7/57 (12%)
leucine-rich repeat 423..442 CDD:275381 6/18 (33%)
LRR_RI 437..>641 CDD:238064 65/268 (24%)
leucine-rich repeat 449..474 CDD:275381 8/29 (28%)
leucine-rich repeat 475..499 CDD:275381 7/26 (27%)
leucine-rich repeat 500..527 CDD:275381 9/28 (32%)
leucine-rich repeat 528..552 CDD:275381 6/72 (8%)
AMN1 552..>660 CDD:187754 37/110 (34%)
leucine-rich repeat 553..580 CDD:275381 10/26 (38%)
leucine-rich repeat 581..606 CDD:275381 7/27 (26%)
leucine-rich repeat 607..632 CDD:275381 9/24 (38%)
leucine-rich repeat 633..652 CDD:275381 8/18 (44%)
fbxl13XP_017209779.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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