DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1434 and SMM1

DIOPT Version :9

Sequence 1:NP_001285237.1 Gene:CG1434 / 32377 FlyBaseID:FBgn0030554 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_014412.1 Gene:SMM1 / 855749 SGDID:S000005298 Length:384 Species:Saccharomyces cerevisiae


Alignment Length:380 Identity:124/380 - (32%)
Similarity:198/380 - (52%) Gaps:58/380 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YRNKLILAPMVRVGTLPMRLLALEMGADIVYTEELVDIKLIKSIRRPNPALGTVDFVDPS----- 81
            |..||:||||||.|.||.||:||..|||:|::.|::|.|||:.:|:.|.||.|||:|.||     
Yeast     4 YAGKLVLAPMVRAGELPTRLMALAHGADLVWSPEIIDKKLIQCVRKENTALQTVDYVVPSKVQTR 68

  Fly    82 DGTIVFRTCAQ-ETSRLVLQMGTSDAGRALAVGKLLQRDISGLDINMGCPKEFSIKGGMGAALLA 145
            ..|:||||..: |:|:|:.|:|::....|......:..|:||:|||.||||.|||..|||:|||.
Yeast    69 PETLVFRTYPKLESSKLIFQIGSASPALATQAALKVINDVSGIDINAGCPKHFSIHSGMGSALLR 133

  Fly   146 DPDKAAHILRTLCSGL----DIPVTCKIRILPDVEGTIDLVQKLAATGIAAIGIHARTRD----E 202
            .||....||:.|...:    ..|::.|||:|...:.|:.||::|.||||..:.:|.|..:    |
Yeast   134 TPDTLCLILKELVKNVGNPHSKPISVKIRLLDTKQDTLQLVKRLCATGITNLTVHCRKTEMRNRE 198

  Fly   203 RPQHPAHPEVLRAVAQAVDIPIIANGGSKNMHCYDDLRKFQMECGADSVMVARAAQINVSIF--- 264
            :|......|:.. :.||.::.:|.||..::...:.||:....:......|:|..|:.:.::|   
Yeast   199 QPITDYIAEIYE-ICQANNVSLIVNGAIRDRSHFHDLQANHWKNTNIGGMIAECAERDPTVFDHT 262

  Fly   265 ------RPEGLLPMDELIEKYLRLCVDYDNAPHNAKYCVQSILRELQETPRGKR-----FLQCQT 318
                  .|..::...|    :::....:||...|.||.:..|:       .||.     |.:|::
Yeast   263 SKPSEDGPSWVVACRE----FIQWATKFDNHIGNTKYMLSRIV-------PGKSVFFQYFARCKS 316

  Fly   319 LQQICEIWELGDYCRRKQRELKTMGNSGRAEVEPPEAL----AKRQKLEDA-AIA 368
            .:::..:             ||.:.:.|.|:.:|.|.|    |:.:.|::| |||
Yeast   317 PEEVSFV-------------LKQLNDDGSAQTDPSEYLENCRAQEKALKNANAIA 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1434NP_001285237.1 DusA 14..287 CDD:223120 101/287 (35%)
DUS_like_FMN 25..266 CDD:239200 98/263 (37%)
Rnc <317..461 CDD:223644 13/57 (23%)
DSRM 395..457 CDD:238007
SMM1NP_014412.1 TIM 31..355 CDD:419668 102/348 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346546
Domainoid 1 1.000 129 1.000 Domainoid score I1148
eggNOG 1 0.900 - - E1_COG0042
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1002
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004414
OrthoInspector 1 1.000 - - oto100223
orthoMCL 1 0.900 - - OOG6_102617
Panther 1 1.100 - - LDO PTHR45936
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2098
SonicParanoid 1 1.000 - - X3701
TreeFam 1 0.960 - -
1312.780

Return to query results.
Submit another query.