DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL38 and CG10298

DIOPT Version :9

Sequence 1:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_649643.1 Gene:CG10298 / 40779 FlyBaseID:FBgn0037432 Length:187 Species:Drosophila melanogaster


Alignment Length:176 Identity:51/176 - (28%)
Similarity:85/176 - (48%) Gaps:19/176 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 PRVPLNISYQLDGDSLAPVYNGNVIKPTEAAKAPQIDFDGLVDPITGQAAGQDTYWTLVASNPDA 208
            |...|.::|  .|..:..|  |..:.||:....|::.:|  .||        :.::||:.::|||
  Fly    22 PATLLTVTY--GGGQVVDV--GGELTPTQVQSQPKVKWD--ADP--------NAFYTLLLTDPDA 72

  Fly   209 HYTNGT--AECLHWFIANIPNGKVSEGQVLAEYLPPFPPRGVGYQRMVFVLYKQQARLDLGSYQL 271
            ......  .|..||.:.|||..:|..|.||.||:...||:|.|..|.||:::||..:|.....::
  Fly    73 PSRKEPKFREWHHWLVVNIPGNQVENGVVLTEYVGAGPPQGTGLHRYVFLVFKQPQKLTCNEPKI 137

  Fly   272 AAADYGNLEKRTFSTLDFYRQHQEQLTPAGLAFYQTNWDESLTQFY 317
            .... |: ::..|||..|..:::.....|| .|:|..||:.:.:.|
  Fly   138 PKTS-GD-KRANFSTSKFMSKYKLGDPIAG-NFFQAQWDDYVPKLY 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 46/162 (28%)
CG10298NP_649643.1 PEBP_euk 24..170 CDD:176644 46/162 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452384
Domainoid 1 1.000 44 1.000 Domainoid score I727
eggNOG 1 0.900 - - E1_COG1881
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11362
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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