DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL38 and mrpl38

DIOPT Version :10

Sequence 1:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_998110.1 Gene:mrpl38 / 405881 ZFINID:ZDB-GENE-040426-2373 Length:345 Species:Danio rerio


Alignment Length:304 Identity:122/304 - (40%)
Similarity:189/304 - (62%) Gaps:14/304 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 EVVARINIGFPQLKESRSAQLKKRLEHLKSQRSDKQLEQLARSNKLIIDLDKVQRTYVKTTGQHD 122
            :.:|.::||.|..:.||..::|:|::.::..:.:.:||:..|.....:.||:|:..:.||.|.|.
Zfish    50 QAIAPVDIGLPYHRPSRKMEVKERMKVVQENKKNPELERANRLQTFRVSLDEVKSEWEKTNGPHK 114

  Fly   123 LRLVADHYGIFEHLFGSAYFVPRVPLNISYQLDGDSLAPVYNGNVIKPTEAAKAPQIDFDGLVDP 187
            :|.:|:||||::.||..|||.|||.|.|.|  ..||.|.|:.||.:.|::|.:||.:.::     
Zfish   115 IRRLAEHYGIYKDLFPMAYFTPRVMLRIGY--GDDSSAAVHYGNHLTPSQAEQAPHVHYE----- 172

  Fly   188 ITGQAAGQDTYWTLVASNPDAHYTNGTAECLHWFIANIPNGKVSEGQVLAEYLPPFPPRGVGYQR 252
                 |.:|:.|||:.::||.|..:...|.|||.:.|||...|:.|..:..||.|||.||.|..|
Zfish   173 -----AEEDSLWTLLLTSPDEHLLDEEQEYLHWLVGNIPGRAVASGDQICPYLCPFPARGTGLHR 232

  Fly   253 MVFVLYKQQARLDLGSYQLAAADYGNLEKRTFSTLDFYRQHQEQLTPAGLAFYQTNWDESLTQFY 317
            .:|:|:||.|.:|..| .:......:|::|:|.||||||:||:.:|||||||:|..||:|:||.:
Zfish   233 FIFILFKQDALVDFAS-DVRPVPCESLKQRSFQTLDFYRKHQDLITPAGLAFFQCQWDQSVTQTF 296

  Fly   318 HDVLKIKEPVYEYDFPKPYLTDQKFFPLKQPFNLYMDKHRDQKQ 361
            |::||:||||:||..|..|...|:.:|..||.. |:|::||..|
Zfish   297 HNILKMKEPVFEYQRPPVYHPPQRKYPHGQPLR-YLDRYRDGAQ 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 65/160 (41%)
mrpl38NP_998110.1 PEBP_euk 138..286 CDD:176644 65/160 (41%)

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