DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL38 and CG6180

DIOPT Version :10

Sequence 1:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_609588.1 Gene:CG6180 / 34683 FlyBaseID:FBgn0032453 Length:257 Species:Drosophila melanogaster


Alignment Length:174 Identity:46/174 - (26%)
Similarity:74/174 - (42%) Gaps:37/174 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 GDSLAPVYNGNVIKPTEAAKAPQIDFDGLVDPITGQAAGQDTYWTLVASNPDAHYTNGT--AECL 218
            ||.:  |..|.|:.||:....|.:.::          |..:..:||..::|||......  .|..
  Fly   104 GDIV--VKPGQVLTPTQVKDEPCVKWE----------ADANKLYTLCMTDPDAPSRKDPKFREWH 156

  Fly   219 HWFIANIPNGKVSEGQVLAEYLPPFPPRGVGYQRMVFVLYKQQARLDLGSYQLAAADYGNLEKRT 283
            ||.:.|||.|.|::|:||:.|:...||...|..|.||::|:|:.:|...            |||.
  Fly   157 HWLVGNIPGGDVAKGEVLSAYVGSGPPPDTGLHRYVFLIYEQRCKLTFD------------EKRL 209

  Fly   284 ----------FSTLDFYRQHQEQLTPAGLAFYQTNWDESLTQFY 317
                      |...:|.:::......|| ..||..:|:.:...|
  Fly   210 PNNSGDGRGGFKIAEFAKKYALGNPIAG-NLYQAEYDDYVPILY 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 43/162 (27%)
CG6180NP_609588.1 PEBP_euk 100..242 CDD:176644 43/162 (27%)

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