DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL38 and LOC3290548

DIOPT Version :10

Sequence 1:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_550759.2 Gene:LOC3290548 / 3290548 VectorBaseID:AGAMI1_013436 Length:211 Species:Anopheles gambiae


Alignment Length:176 Identity:49/176 - (27%)
Similarity:85/176 - (48%) Gaps:19/176 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 PRVPLNISYQLDGDSLAPVYNGNVIKPTEAAKAPQIDFDGLVDPITGQAAGQDTYWTLVASNPDA 208
            |...:.|:|.   .|...|..||.:.||:....|::.::  |:|        ...:||:.::|||
Mosquito    46 PEQTIKITYP---QSDVEVSLGNQLTPTQVKARPKLCWE--VEP--------SALYTLLMADPDA 97

  Fly   209 HYTNG--TAECLHWFIANIPNGKVSEGQVLAEYLPPFPPRGVGYQRMVFVLYKQQARLDLGSYQL 271
            ...:.  .....||.:.|||...|..|.|||:|:...||:|.|..|.||::|||.:|:......|
Mosquito    98 PSRSNPEMRSWKHWLVGNIPGADVDAGDVLADYVGSGPPQGTGLHRYVFLVYKQPSRIVFNETVL 162

  Fly   272 AAADYGNLEKRTFSTLDFYRQHQEQLTPAGLAFYQTNWDESLTQFY 317
            ::.   |..:..::..:|.:.::..:..|| .|||..:|:.:.:.|
Mosquito   163 SSR---NPNRGKWNPAEFVKDYELGVPVAG-NFYQAQYDDYVPELY 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 45/162 (28%)
LOC3290548XP_550759.2 None

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