DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL38 and Mrpl38

DIOPT Version :9

Sequence 1:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001009369.2 Gene:Mrpl38 / 303685 RGDID:1311180 Length:380 Species:Rattus norvegicus


Alignment Length:319 Identity:128/319 - (40%)
Similarity:195/319 - (61%) Gaps:26/319 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 REENVEDPEVVARINIGFPQLKESRSAQLKKRLEHLKSQRSDKQLEQLARSNKLIIDLDKVQRTY 114
            ||..:::.:...|||||.|..:.||:.:|::|...|:..|::.:.|:.||.....|.|:.|:..:
  Rat    75 REYFLKETDPKDRINIGLPPPRVSRTQKLQERKRFLQELRANSEEERAARLRTASIPLEAVRAEW 139

  Fly   115 VKTTGQHDLRLVADHYGIFEHLFGSAYFVPRVPLNISYQLDGDSLAPVYNGNVIKPTEAAKAPQI 179
            .:|.|.:..:.:|::||::..||..|.|||.|||:::|.|..:.|.|||:||.:.||||::||::
  Rat   140 ERTCGPYHKQRLAEYYGLYRDLFHGATFVPWVPLHVAYALGEEDLIPVYHGNEVTPTEASQAPEV 204

  Fly   180 DFDGLVDPITGQAAGQDTYWTLVASNPDAHYTNGTAECLHWFIANIPNGKVSEGQVLAEYLPPFP 244
            .::          |.:|:.|||:..|.|.|.....||.|||.:.|||:.:|:|||....||||||
  Rat   205 TYE----------ADKDSLWTLLFINLDGHLLEPDAEYLHWLVTNIPSNRVAEGQESCPYLPPFP 259

  Fly   245 PRGVGYQRMVFVLYKQQARLDLGS-------YQLAAADYGNLEKRTFSTLDFYRQHQEQLTPAGL 302
            .||.|:.|..|:|:||...::...       ||||        :|||.|||||::|||.:|||||
  Rat   260 ARGSGFHRFAFLLFKQDKPINFSEDTRPSPCYQLA--------QRTFHTLDFYKKHQEAMTPAGL 316

  Fly   303 AFYQTNWDESLTQFYHDVLKIKEPVYEYDFPKPYLTDQKFFPLKQPFNLYMDKHRDQKQ 361
            ||:|..||:|:|..:|.:|.::|||:|:..|.||...||.||.:||.. |:|::||..:
  Rat   317 AFFQCRWDDSVTHTFHQLLDMREPVFEFVRPPPYHPKQKRFPHQQPLR-YLDRYRDSHE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 73/167 (44%)
Mrpl38NP_001009369.2 PEBP_euk 171..321 CDD:176644 73/167 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353373
Domainoid 1 1.000 98 1.000 Domainoid score I7052
eggNOG 1 0.900 - - E1_COG1881
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11476
Inparanoid 1 1.050 252 1.000 Inparanoid score I3136
OMA 1 1.010 - - QHG46095
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 1 1.000 - - FOG0007434
OrthoInspector 1 1.000 - - oto95602
orthoMCL 1 0.900 - - OOG6_107564
Panther 1 1.100 - - LDO PTHR11362
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5565
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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