DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL38 and Mrpl38

DIOPT Version :10

Sequence 1:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001009369.2 Gene:Mrpl38 / 303685 RGDID:1311180 Length:380 Species:Rattus norvegicus


Alignment Length:319 Identity:128/319 - (40%)
Similarity:195/319 - (61%) Gaps:26/319 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 REENVEDPEVVARINIGFPQLKESRSAQLKKRLEHLKSQRSDKQLEQLARSNKLIIDLDKVQRTY 114
            ||..:::.:...|||||.|..:.||:.:|::|...|:..|::.:.|:.||.....|.|:.|:..:
  Rat    75 REYFLKETDPKDRINIGLPPPRVSRTQKLQERKRFLQELRANSEEERAARLRTASIPLEAVRAEW 139

  Fly   115 VKTTGQHDLRLVADHYGIFEHLFGSAYFVPRVPLNISYQLDGDSLAPVYNGNVIKPTEAAKAPQI 179
            .:|.|.:..:.:|::||::..||..|.|||.|||:::|.|..:.|.|||:||.:.||||::||::
  Rat   140 ERTCGPYHKQRLAEYYGLYRDLFHGATFVPWVPLHVAYALGEEDLIPVYHGNEVTPTEASQAPEV 204

  Fly   180 DFDGLVDPITGQAAGQDTYWTLVASNPDAHYTNGTAECLHWFIANIPNGKVSEGQVLAEYLPPFP 244
            .::          |.:|:.|||:..|.|.|.....||.|||.:.|||:.:|:|||....||||||
  Rat   205 TYE----------ADKDSLWTLLFINLDGHLLEPDAEYLHWLVTNIPSNRVAEGQESCPYLPPFP 259

  Fly   245 PRGVGYQRMVFVLYKQQARLDLGS-------YQLAAADYGNLEKRTFSTLDFYRQHQEQLTPAGL 302
            .||.|:.|..|:|:||...::...       ||||        :|||.|||||::|||.:|||||
  Rat   260 ARGSGFHRFAFLLFKQDKPINFSEDTRPSPCYQLA--------QRTFHTLDFYKKHQEAMTPAGL 316

  Fly   303 AFYQTNWDESLTQFYHDVLKIKEPVYEYDFPKPYLTDQKFFPLKQPFNLYMDKHRDQKQ 361
            ||:|..||:|:|..:|.:|.::|||:|:..|.||...||.||.:||.. |:|::||..:
  Rat   317 AFFQCRWDDSVTHTFHQLLDMREPVFEFVRPPPYHPKQKRFPHQQPLR-YLDRYRDSHE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 73/167 (44%)
Mrpl38NP_001009369.2 PEBP_euk 171..321 CDD:176644 73/167 (44%)

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