DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL38 and Pebp1

DIOPT Version :10

Sequence 1:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_061346.2 Gene:Pebp1 / 23980 MGIID:1344408 Length:187 Species:Mus musculus


Alignment Length:181 Identity:50/181 - (27%)
Similarity:78/181 - (43%) Gaps:21/181 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 PRVPLNISYQ-LDGDSLAPVYNGNVIKPTEAAKAP-QIDFDGLVDPITGQAAGQDTYWTLVASNP 206
            |:..|.:.|. :..|.|     |.|:.||:....| .|.:||| ||        ...:|||.::|
Mouse    21 PQHALRVDYAGVTVDEL-----GKVLTPTQVMNRPSSISWDGL-DP--------GKLYTLVLTDP 71

  Fly   207 DAHYTNGT--AECLHWFIANIPNGKVSEGQVLAEYLPPFPPRGVGYQRMVFVLYKQQARLDLGSY 269
            ||......  .|..|:.:.|:....:|.|.||::|:...||.|.|..|.|:::|:|:..|.....
Mouse    72 DAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSDYVGSGPPSGTGLHRYVWLVYEQEQPLSCDEP 136

  Fly   270 QLAAADYGNLEKRTFSTLDFYRQHQEQLTPAGLAFYQTNWDESLTQFYHDV 320
            .|:.....|..|....|   :|:......|.....||..||:.:.:.|..:
Mouse   137 ILSNKSGDNRGKFKVET---FRKKYNLGAPVAGTCYQAEWDDYVPKLYEQL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 45/164 (27%)
Pebp1NP_061346.2 PEBP_euk 25..171 CDD:176644 45/162 (28%)
Interaction with RAF1. /evidence=ECO:0000250 93..134 14/40 (35%)

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