DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL38 and mrpl-38

DIOPT Version :9

Sequence 1:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_490808.1 Gene:mrpl-38 / 171682 WormBaseID:WBGene00021327 Length:413 Species:Caenorhabditis elegans


Alignment Length:403 Identity:119/403 - (29%)
Similarity:195/403 - (48%) Gaps:79/403 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HTIRGKPPGVARSLEQRIREENVEDPEVVARINIGFPQLKESRSAQLKKRLEHLKSQRSDKQLEQ 96
            |.|  :|....:||:..:::..:|      :|||||.:.:.:..|:        ||.....:||:
 Worm    65 HII--EPAEHMKSLKVLMQKSEIE------QINIGFKRREVAGKAE--------KSAEDRIELER 113

  Fly    97 LARSNKLIIDLDKVQRTYVKTTGQHDLRLVADHYGIFEHLFGSAYFVPRVPLNISYQLDGDSLAP 161
            .:|..:|.||:|.:....:.         :..|:.:|:||||...|...|. |:....:.|.:  
 Worm   114 KSRHMQLKIDIDHLDVENLS---------IYRHFQVFDHLFGDNIFFENVQ-NLQVNFENDIV-- 166

  Fly   162 VYNGNVIKPTEAAKAPQIDFDGLVDPITGQAAGQDTYWTLVASNPDAHY----TNGTAECLHWFI 222
            |::||||......|.|:|..:.:     |...|   :.||:..|.|.:.    .||  |.:.|.|
 Worm   167 VHSGNVITANSTLKRPEITIESV-----GNGGG---FNTLLMINLDGNALDLGKNG--EIVQWMI 221

  Fly   223 ANIPNGK-VSEGQVLAEYLPPFPPRGVGYQRMVFVLYKQQARLDLGSYQLAAADYGN-LEKRTFS 285
            :|||:|: :|.|..:.:||.|.|..|.||.|:.|||::.:..:|   :|:    .|| |:.|...
 Worm   222 SNIPDGEAISAGSEIIDYLQPLPFYGTGYHRVAFVLFRHEKPVD---FQI----QGNSLDTRIHE 279

  Fly   286 TLDFYRQHQEQLTPAGLAFYQTNWDESLTQFYHDVLKIKEPVYEYDFPKPYLTDQKFFPLK-QPF 349
            ...||::|:..:||:.:.|:||::|.|:....|. |.:..|:|||:........|:.||.| |||
 Worm   280 ISKFYKKHEATITPSAIRFFQTSYDNSVKMALHG-LGMTSPLYEYEHRPALKPAQREFPEKPQPF 343

  Fly   350 NLYMDKHRDQKQVNKEYLERKLAK-------------THPFEGPKKPLRYPNAHPIRDVPSWLRT 401
            :||:|.:||.|:|.:|.||::||:             |...|..||            :|:||..
 Worm   344 DLYLDMYRDPKEVEQEMLEKRLAEVKLDYVKEPKWVDTDYVENKKK------------LPAWLHA 396

  Fly   402 EIRKERLGTGRVQ 414
            : :.||.|.|..:
 Worm   397 K-KLERDGVGHAK 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 51/166 (31%)
mrpl-38NP_490808.1 PEBP_euk 156..301 CDD:176644 50/163 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166953
Domainoid 1 1.000 76 1.000 Domainoid score I5835
eggNOG 1 0.900 - - E1_COG1881
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I3013
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46095
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 1 1.000 - - FOG0007434
OrthoInspector 1 1.000 - - oto18794
orthoMCL 1 0.900 - - OOG6_107564
Panther 1 1.100 - - LDO PTHR11362
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4247
SonicParanoid 1 1.000 - - X5565
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.840

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