DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL38 and pebp1

DIOPT Version :10

Sequence 1:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_002938131.1 Gene:pebp1 / 100497751 XenbaseID:XB-GENE-22069563 Length:185 Species:Xenopus tropicalis


Alignment Length:182 Identity:42/182 - (23%)
Similarity:77/182 - (42%) Gaps:30/182 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 PRVPLNISYQLDGDSLAPVYNGNVIKPTEAAKAPQIDFDGLVDPITGQAAGQDTYWTLVASNPDA 208
            |:.||.:::    .|:.....|.|:.||:....|.|:::.:         .....:|::.::|| 
 Frog    21 PKYPLKVAF----GSVCVEELGQVLTPTQVQHCPNIEWESM---------DSSKLYTVIFTDPD- 71

  Fly   209 HYTNGTAEC----LHWFIA-NIPNGKVSEGQVLAEYLPPFPPRGVGYQRMVFVLYKQQARLDLGS 268
              .....||    .|.|:| |:....:|.|.:|..|:...|.:|.|..|...::|:|..|:    
 Frog    72 --VPSRKECHLGEWHHFLAVNVKGNDLSSGCILTAYVGSGPGKGTGLHRYTILVYEQAGRV---- 130

  Fly   269 YQLAAADYGNL---EKRTFSTLDFYRQHQEQLTPAGLAFYQTNWDESLTQFY 317
             |......||.   .:..|...:|.::::.....||..| |..||:.:.:.|
 Frog   131 -QCTERILGNTSAEHRGKFKASEFRKKYKLAAPIAGTCF-QAEWDDHVPKLY 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 37/168 (22%)
pebp1XP_002938131.1 PEBP_euk 24..170 CDD:176644 37/167 (22%)

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