DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11674 and NimC3

DIOPT Version :10

Sequence 1:NP_572948.1 Gene:CG11674 / 32374 FlyBaseID:FBgn0030551 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster


Alignment Length:168 Identity:31/168 - (18%)
Similarity:54/168 - (32%) Gaps:59/168 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RW--ILLLLAGF--LATGRAEDLLELSCSSDAQCAQFERGRCVDMACICTARG--------SGER 58
            ||  |.:...|:  :..|..|.:.:.:|.:.:.||:.:|..|        .||        :|.:
  Fly    74 RWDNIQVCCPGYRTILFGFCEPVCQEACPAHSYCAEPDRCHC--------QRGYEPSHHHTTGHQ 130

  Fly    59 VPCTPLEERLKLTNIIGGACPCPMPNAICHTRWQQCHCSEGHVSSDDRRRCLPAVVPVGGSCEFQ 123
            :.|.|         :..|.||            :..||     .:.:...|.|............
  Fly   131 LICRP---------VCQGGCP------------EHSHC-----VAHNECECWPGFKDASSWFSLS 169

  Fly   124 QQCQRADRFSSCIGNQCLCLNQFEFHEGR--CLSVLQS 159
            .:|:|..           |.::..|..||  |:.:..|
  Fly   170 LRCERVQ-----------CGHEQRFDPGRRACVQIEMS 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11674NP_572948.1 EB 96..153 CDD:460294 9/58 (16%)
NimC3NP_524928.2 None

Return to query results.
Submit another query.