DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11674 and Scarf2

DIOPT Version :10

Sequence 1:NP_572948.1 Gene:CG11674 / 32374 FlyBaseID:FBgn0030551 Length:344 Species:Drosophila melanogaster
Sequence 2:XP_038944006.1 Gene:Scarf2 / 287949 RGDID:1306013 Length:838 Species:Rattus norvegicus


Alignment Length:324 Identity:75/324 - (23%)
Similarity:95/324 - (29%) Gaps:111/324 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QCAQFERGRCVDMA--CICTARGSGERVPCTPLEERLKLTNIIGGACPCPMPNAICHTRWQQCHC 96
            :|:....|:|.|:.  |.|.||..|.|  |.             .||.|  .:..||.|...|.|
  Rat   117 RCSCHPHGQCEDVTGQCTCHARRWGAR--CE-------------HACQC--QHGTCHPRSGACRC 164

  Fly    97 SEGHVSSDDRRRCLPAVV----PVGGSCEFQQQCQRADRFSSCIGNQCLC-LNQFEFHEGRCLSV 156
            ..|...:.....|..:..    |..|:|    .|.......|| .|||.| .:..|...|||   
  Rat   165 EPGWWGAQCASACYCSATSRCDPQTGAC----LCHAGWWGRSC-NNQCSCNSSPCEQQSGRC--- 221

  Fly   157 LQSSCLE-------DKDCGSCGASICLTKTKRCGCSKNFVHNHNMTKCIKGSAYG-------DTC 207
               .|.|       |:.| .|....|......|.|...:...:....|..| .||       ..|
  Rat   222 ---QCRERTFGARCDRYC-QCFRGRCHPVDGTCACDPGYRGKYCREPCPAG-FYGLGCRRRCGQC 281

  Fly   208 EHSSPCKLNLGADGRCLDHLC-----------VCRSTHYPKRVANEVAKDENDDLDAVNNLERIT 261
            :...||.:   .:||||  .|           .|.:..|.:...:.                   
  Rat   282 KGQQPCTV---VEGRCL--TCEPGWNGTKCDQPCATGFYGEGCGHR------------------- 322

  Fly   262 CAPIVPFGALCRNDSECRMQPMDQENATASIGHPMVCNWG------ECSCSKTHRLEDNKCVFV 319
            |.|       ||:...|       .:.|....|   ||.|      |..||.....||  |.||
  Rat   323 CPP-------CRDGHAC-------NHVTGKCTH---CNAGWIGDRCETKCSNGTYGED--CAFV 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11674NP_572948.1 EB 96..153 CDD:460294 15/61 (25%)
Scarf2XP_038944006.1 PHA03247 <683..837 CDD:223021
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.