DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11674 and Stab1

DIOPT Version :10

Sequence 1:NP_572948.1 Gene:CG11674 / 32374 FlyBaseID:FBgn0030551 Length:344 Species:Drosophila melanogaster
Sequence 2:XP_008769275.1 Gene:Stab1 / 100363145 RGDID:2324745 Length:2630 Species:Rattus norvegicus


Alignment Length:378 Identity:89/378 - (23%)
Similarity:129/378 - (34%) Gaps:122/378 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GFLATGRAEDLLELSCSSDA--------QCAQFERGRCVD-----MACICTARGSGERVP----- 60
            ||..|.     .|| |:..|        :||  ..|||.:     .:|.|....:|.|..     
  Rat  2059 GFAGTA-----CEL-CAPGAFGPQCQACRCA--PHGRCDEGLGGSGSCFCDEGWTGPRCDVQLEL 2115

  Fly    61 ---CTPLEERLKLTNIIGGACPCPMPNAICHTRWQQCHCSEGHVSSDDRRRCLPA-VVPVG-GSC 120
               |||               || .|.|:|.. ...|.||.|:  ..|.|.|..| :...| |.|
  Rat  2116 QPVCTP---------------PC-APQAVCRV-GNSCECSLGY--EGDGRVCTVADLCQKGHGGC 2161

  Fly   121 EFQQQCQRADRFSSCIGN--QCLCLNQFEFH------EGRCLSVLQSSCLEDKDCGSCGASICLT 177
            .....|       |.:|.  .|.||..:|..      ...||...:..|.|..||.:.|.:    
  Rat  2162 SKHANC-------SQVGTVVTCTCLPAYEGDGWSCRARNPCLDGHRGGCSEHADCFNTGPN---- 2215

  Fly   178 KTKRCGCSKNFVHNHNMTKCIKG-SAYGDTC-EHSSPCKLNLGADGRCLD-----------HLCV 229
             |:||.|...:|.:.  .:|::. ....|.| ..||||.    .|..|.|           |:  
  Rat  2216 -TRRCECHTGYVGDG--LQCLEELEPPVDRCLAESSPCH----TDALCTDLHFQEKQAGVFHI-- 2271

  Fly   230 CRSTHYPKRV----ANEVAKDENDDLDAVNNLERITCAPIVPFGALCRNDSECRMQPMDQENATA 290
             ::|..|..:    |.|..:|:..||   .:|.:::.|..:.|..       |.:..:    |..
  Rat  2272 -QATSGPYGLTFSEAKEACEDQGADL---ASLPQLSAAQQLGFHV-------CFLGWL----ANG 2321

  Fly   291 SIGHPMVCNWGECSCSKTHRLE-----------DNKCVFVENSATNYQLRGFV 332
            |..||:|....:|..::...:.           |..|..|.:.|...:: |||
  Rat  2322 SAAHPVVTPAADCGNNRVGVISLGVRKNLSERWDAYCYRVRDVACQCRV-GFV 2373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11674NP_572948.1 EB 96..153 CDD:460294 17/66 (26%)
Stab1XP_008769275.1 FAS1 502..647 CDD:441906
EGF_3 834..863 CDD:463759
EGF_3 918..949 CDD:463759
EGF_3 955..991 CDD:463759
Fasciclin <1100..1180 CDD:396845
Fasciclin 1224..1313 CDD:470649
EGF_3 1519..1555 CDD:463759
EGF_3 1561..1595 CDD:463759
EGF_3 1604..1641 CDD:463759
Fasciclin 1666..1770 CDD:396845
Fasciclin 1796..1926 CDD:396845
EGF_Lam 2037..2082 CDD:238012 7/28 (25%)
EGF_3 2154..2189 CDD:463759 10/41 (24%)
EGF_3 2195..2232 CDD:463759 12/43 (28%)
Link_Domain 2267..2359 CDD:470631 19/108 (18%)
FAS1 2426..2521 CDD:214719
Fasciclin 391..494 CDD:470649
Blue background indicates that the domain is not in the aligned region.

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