DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(1)G0007 and ECM16

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_013847.1 Gene:ECM16 / 855158 SGDID:S000004735 Length:1267 Species:Saccharomyces cerevisiae


Alignment Length:1305 Identity:346/1305 - (26%)
Similarity:545/1305 - (41%) Gaps:359/1305 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KRRAEKERSERLISFKD------SEF-------------DDTGGGSSTPQANASGASSEFAFKKP 101
            ||..||.||..:...|:      .:|             |.....|||.:.||:....|     |
Yeast     6 KRFNEKARSGHMAKLKELKRIRNKQFTRQDENDERVENPDSAPAESSTTEPNANAEILE-----P 65

  Fly   102 DTKSFEKL-RGQLREHKDDTPSHTGGVSEKARERLREH-IQRDRKRGPVSSTAAEGRDRDRDWDR 164
            .|:..:|: :.:|:|......|....:.:|..::..|| ::|:.::..:      |:.:|...|.
Yeast    66 LTEEEKKMKKRKLQELFTPKESKVSRLKKKRLDKFIEHQLKREERKTII------GKLQDYKIDT 124

  Fly   165 DRRRDRDRDRDRDRDRRQHRERERDRHRSWDRD-RGRDRDRDRSMSERSVHTPREPGTPGGSSGG 228
            ...    ....|..:.||.::.|.....|.:|. ||.::..:....|.......|.| .||||  
Yeast   125 SLL----TSSKRLGEGRQTKKEEFKEALSLERQGRGNEQTNEILYEEYEPKVWDEYG-EGGSS-- 182

  Fly   229 ISNSSWDDEDGEFGQRKSDWDMPTPRRHGNKSGDWSV-----RSGGSRRNHGRQDDTV----RPT 284
                  :|:|||.....|...||.|..:..|.....:     :.|||..:.|..:..|    ..|
Yeast   183 ------EDDDGEDDFEASFGSMPKPTDNEEKKSSGFIDHRPAKFGGSGLSFGFSNIKVINKESKT 241

  Fly   285 PAHRYNQW----------AHGRKRSGATPWGEDPESLDLWEEEQRRLDREWYNIDEGYDDENNPF 339
            |..:|| |          .||:         ||....|...|:.   |.|   .|:..:|:.:|.
Yeast   242 PKKKYN-WRQRVEMEELKKHGK---------EDEMDFDTTSEDD---DEE---EDQEEEDKMHPS 290

  Fly   340 GGPNSEYFRKREEQLEQKRTKRISAQQRQNNRDNELWERNRMLTSGVVTLISVNDDFDEEALERV 404
            ..|        .|::|...::..|.:..||:..||.                  .|:..:.::::
Yeast   291 ENP--------LEEVESADSETGSEKFDQNDVANEF------------------KDWANQEIKKL 329

  Fly   405 HLLVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQKERRKAQKKHWEL 469
            ......::.|.|:  |.:    :|::. |:...|                               
Yeast   330 EGRDQELVTPTLN--IDY----KPIIR-KEDLDD------------------------------- 356

  Fly   470 SGTKLGNIMGVQR---PQDEDDMRFDKEKDKADYRKDQKFADHMRDQDTGGKSDFSRKKTISEQR 531
                     |:|.   |.:|:..|      ||.|                  .:.||...|.:.|
Yeast   357 ---------GLQEAYVPINENSTR------KAFY------------------VEVSRSDEIQKAR 388

  Fly   532 RFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKR------GMIGCTQPRRV 590
            ..||||....:::..|..|.|:||.||||||||||:.|:|:|.|:...      ||:|.||||||
Yeast   389 IQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQPRRV 453

  Fly   591 AAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDE 655
            ||:|:|:||::|:... |..|||.|||:....|.|.:|:||||:||||.:.|.:|..||:||:||
Yeast   454 AAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKLTKYSSIIIDE 517

  Fly   656 AHERSLSTDVLFGLLREIV---ARRH--------DLKLIVTSATMDSSKFA---TFFGNV-PTFT 705
            ||||:::||:|.|:|...|   |:.|        .||||:.|||:..|.|:   |.|... |...
Yeast   518 AHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATLRVSDFSENKTLFPIAPPVLQ 582

  Fly   706 IPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQ------------------ 752
            :..|.|||.:.|::.|..:|.:.|.::..::|.....|.:|:|:.||                  
Yeast   583 VDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAILVFLTGQQEITHMVKRLRKEFPFKK 647

  Fly   753 --------------------------EDIEVTCEVL----------------------------- 762
                                      |||:.:.:|:                             
Yeast   648 NSKYNKDLETPVSKMGINSKTTDLEAEDIDFSVQVIDQDKFKSAIRYEEDEGNSGNGEDEEDEEE 712

  Fly   763 ---EERLAEIDNA-PALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVI 823
               ||.|.|...| ..|.:||:||.||:..|.::|||...|.|.|:||||:||||||:.|:.||:
Yeast   713 EGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVV 777

  Fly   824 DSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEI 888
            |||..|.:.||...|:.:.::..:|:|:||||||||||||||..||||:...::.:....:.|||
Yeast   778 DSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEI 842

  Fly   889 QRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPL 953
            .|..:.:.||.:||:.:.:::.|.|..||.:..:..::..|..|||||:...:|..|::|:.|||
Yeast   843 LRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPL 907

  Fly   954 DPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFY------------RPKGREDEADGVRE----- 1001
            .|...:||:|:....|...::.|||.|||...|.            :|...|:..|.:||     
Yeast   908 SPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFINEFELGINEISRKPNPDENLDDKIREHDEST 972

  Fly  1002 -------------KFQRPE---------SDHLTYLNVY--QQWRQNNYSSTWCNEHFIHIKAMRK 1042
                         ||.:..         ||....|:|.  ..:........:..::|:..|.|.:
Yeast   973 PGMDPELKKELRSKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEIFMKKNFLRGKLMEE 1037

  Fly  1043 VREVRQQL----KDIMTQQNLSV----------ISCGIDWDIVRKCICSAY-----------FYQ 1082
            :.::|:||    |...:::|::|          |...|...::::.||:.:           |..
Yeast  1038 IVKLRKQLMYIIKSNTSKENIAVVIRNEDLKSDIPSVIQIKLLKQMICAGFVDHVAVRADVLFPD 1102

  Fly  1083 AARLKGIGEYVN------LRTGMP----C--HLHPTSALYGLG-TTPDYVVYHELIMTAKEYMQC 1134
            .|::......:|      |.|..|    |  ::||||.|..|| ..|.|::|:.|.:......:.
Yeast  1103 DAKITNRTSIINIPYIPVLATRTPNIEDCFVYIHPTSILNNLGEMPPKYMLYYSLHLGGNNKTRM 1167

  Fly  1135 ATAVD 1139
            .|..|
Yeast  1168 NTLCD 1172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 94/206 (46%)
DEXDc 551..689 CDD:238005 77/154 (50%)
HELICc 722..870 CDD:238034 68/224 (30%)
HA2 932..1014 CDD:214852 32/120 (27%)
OB_NTP_bind 1048..1148 CDD:285018 29/130 (22%)
ECM16NP_013847.1 HrpA 360..1267 CDD:224557 256/838 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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