DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prp16 and ECM16

DIOPT Version :10

Sequence 1:NP_572947.1 Gene:Prp16 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_013847.1 Gene:ECM16 / 855158 SGDID:S000004735 Length:1267 Species:Saccharomyces cerevisiae


Alignment Length:1305 Identity:346/1305 - (26%)
Similarity:545/1305 - (41%) Gaps:359/1305 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KRRAEKERSERLISFKD------SEF-------------DDTGGGSSTPQANASGASSEFAFKKP 101
            ||..||.||..:...|:      .:|             |.....|||.:.||:....|     |
Yeast     6 KRFNEKARSGHMAKLKELKRIRNKQFTRQDENDERVENPDSAPAESSTTEPNANAEILE-----P 65

  Fly   102 DTKSFEKL-RGQLREHKDDTPSHTGGVSEKARERLREH-IQRDRKRGPVSSTAAEGRDRDRDWDR 164
            .|:..:|: :.:|:|......|....:.:|..::..|| ::|:.::..:      |:.:|...|.
Yeast    66 LTEEEKKMKKRKLQELFTPKESKVSRLKKKRLDKFIEHQLKREERKTII------GKLQDYKIDT 124

  Fly   165 DRRRDRDRDRDRDRDRRQHRERERDRHRSWDRD-RGRDRDRDRSMSERSVHTPREPGTPGGSSGG 228
            ...    ....|..:.||.::.|.....|.:|. ||.::..:....|.......|.| .||||  
Yeast   125 SLL----TSSKRLGEGRQTKKEEFKEALSLERQGRGNEQTNEILYEEYEPKVWDEYG-EGGSS-- 182

  Fly   229 ISNSSWDDEDGEFGQRKSDWDMPTPRRHGNKSGDWSV-----RSGGSRRNHGRQDDTV----RPT 284
                  :|:|||.....|...||.|..:..|.....:     :.|||..:.|..:..|    ..|
Yeast   183 ------EDDDGEDDFEASFGSMPKPTDNEEKKSSGFIDHRPAKFGGSGLSFGFSNIKVINKESKT 241

  Fly   285 PAHRYNQW----------AHGRKRSGATPWGEDPESLDLWEEEQRRLDREWYNIDEGYDDENNPF 339
            |..:|| |          .||:         ||....|...|:.   |.|   .|:..:|:.:|.
Yeast   242 PKKKYN-WRQRVEMEELKKHGK---------EDEMDFDTTSEDD---DEE---EDQEEEDKMHPS 290

  Fly   340 GGPNSEYFRKREEQLEQKRTKRISAQQRQNNRDNELWERNRMLTSGVVTLISVNDDFDEEALERV 404
            ..|        .|::|...::..|.:..||:..||.                  .|:..:.::::
Yeast   291 ENP--------LEEVESADSETGSEKFDQNDVANEF------------------KDWANQEIKKL 329

  Fly   405 HLLVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQKERRKAQKKHWEL 469
            ......::.|.|:  |.:    :|::. |:...|                               
Yeast   330 EGRDQELVTPTLN--IDY----KPIIR-KEDLDD------------------------------- 356

  Fly   470 SGTKLGNIMGVQR---PQDEDDMRFDKEKDKADYRKDQKFADHMRDQDTGGKSDFSRKKTISEQR 531
                     |:|.   |.:|:..|      ||.|                  .:.||...|.:.|
Yeast   357 ---------GLQEAYVPINENSTR------KAFY------------------VEVSRSDEIQKAR 388

  Fly   532 RFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKR------GMIGCTQPRRV 590
            ..||||....:::..|..|.|:||.||||||||||:.|:|:|.|:...      ||:|.||||||
Yeast   389 IQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQPRRV 453

  Fly   591 AAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDE 655
            ||:|:|:||::|:... |..|||.|||:....|.|.:|:||||:||||.:.|.:|..||:||:||
Yeast   454 AAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKLTKYSSIIIDE 517

  Fly   656 AHERSLSTDVLFGLLREIV---ARRH--------DLKLIVTSATMDSSKFA---TFFGNV-PTFT 705
            ||||:::||:|.|:|...|   |:.|        .||||:.|||:..|.|:   |.|... |...
Yeast   518 AHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATLRVSDFSENKTLFPIAPPVLQ 582

  Fly   706 IPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQ------------------ 752
            :..|.|||.:.|::.|..:|.:.|.::..::|.....|.:|:|:.||                  
Yeast   583 VDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAILVFLTGQQEITHMVKRLRKEFPFKK 647

  Fly   753 --------------------------EDIEVTCEVL----------------------------- 762
                                      |||:.:.:|:                             
Yeast   648 NSKYNKDLETPVSKMGINSKTTDLEAEDIDFSVQVIDQDKFKSAIRYEEDEGNSGNGEDEEDEEE 712

  Fly   763 ---EERLAEIDNA-PALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVI 823
               ||.|.|...| ..|.:||:||.||:..|.::|||...|.|.|:||||:||||||:.|:.||:
Yeast   713 EGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVV 777

  Fly   824 DSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEI 888
            |||..|.:.||...|:.:.::..:|:|:||||||||||||||..||||:...::.:....:.|||
Yeast   778 DSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEI 842

  Fly   889 QRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPL 953
            .|..:.:.||.:||:.:.:::.|.|..||.:..:..::..|..|||||:...:|..|::|:.|||
Yeast   843 LRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPL 907

  Fly   954 DPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFY------------RPKGREDEADGVRE----- 1001
            .|...:||:|:....|...::.|||.|||...|.            :|...|:..|.:||     
Yeast   908 SPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFINEFELGINEISRKPNPDENLDDKIREHDEST 972

  Fly  1002 -------------KFQRPE---------SDHLTYLNVY--QQWRQNNYSSTWCNEHFIHIKAMRK 1042
                         ||.:..         ||....|:|.  ..:........:..::|:..|.|.:
Yeast   973 PGMDPELKKELRSKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEIFMKKNFLRGKLMEE 1037

  Fly  1043 VREVRQQL----KDIMTQQNLSV----------ISCGIDWDIVRKCICSAY-----------FYQ 1082
            :.::|:||    |...:::|::|          |...|...::::.||:.:           |..
Yeast  1038 IVKLRKQLMYIIKSNTSKENIAVVIRNEDLKSDIPSVIQIKLLKQMICAGFVDHVAVRADVLFPD 1102

  Fly  1083 AARLKGIGEYVN------LRTGMP----C--HLHPTSALYGLG-TTPDYVVYHELIMTAKEYMQC 1134
            .|::......:|      |.|..|    |  ::||||.|..|| ..|.|::|:.|.:......:.
Yeast  1103 DAKITNRTSIINIPYIPVLATRTPNIEDCFVYIHPTSILNNLGEMPPKYMLYYSLHLGGNNKTRM 1167

  Fly  1135 ATAVD 1139
            .|..|
Yeast  1168 NTLCD 1172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp16NP_572947.1 HrpA 534..>1148 CDD:441249 246/783 (31%)
ECM16NP_013847.1 HrpA 390..>940 CDD:441249 201/550 (37%)
HA2 879..1006 CDD:461295 33/126 (26%)
OB_NTP_bind 1080..1184 CDD:400182 22/93 (24%)

Return to query results.
Submit another query.