DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp16 and AT1G58050

DIOPT Version :10

Sequence 1:NP_572947.1 Gene:Prp16 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_176102.1 Gene:AT1G58050 / 842172 AraportID:AT1G58050 Length:1417 Species:Arabidopsis thaliana


Alignment Length:1190 Identity:292/1190 - (24%)
Similarity:485/1190 - (40%) Gaps:328/1190 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 SSWDDEDGEFGQRKSD----------WDMPTPRRHGNKSGDWSVRSGGSRRNHGRQDDTVRPTPA 286
            ||.|:.|...|.|..:          ::....:|.|:|||  ..::|.:......:.:.:.|:.|
plant   207 SSDDERDKVSGPRSFEVIAKEYCVERYNAIKAKRKGDKSG--QSQAGLAICKLKEEMNALGPSEA 269

  Fly   287 HRYNQWAHGRKRSGATPWGEDPESLDLWEEEQRRLD--REWYNID----EGYDD---ENNPFGGP 342
            ...:::...|         :|.|.....|.....||  .|..|.|    :.:||   :.||.|..
plant   270 ILESEFQRDR---------QDCEGAREKEVASSVLDDVHESVNADAFFFQLFDDLTLDTNPVGSC 325

  Fly   343 NSE--------------------------YFRKREE--QLEQKRTKRISAQQRQNNRDNELWE-- 377
            .||                          |.....|  :|::|...|....::...:.|.:|:  
plant   326 KSEEQESVVSNDSLDDLDLGDLFDEDVPPYVPSPHELLELQKKEIMRELCNEKHLTKLNGIWKKG 390

  Fly   378 -------------------------------RNRMLTSGVVT-------------LISVN----- 393
                                           ||...|:.|:.             |:::.     
plant   391 EAQKIPKALLHQLCQRSGWIAPKFNKVTGEGRNFSYTTSVMRKSSGFGKSRQAGGLVTIQLPHQV 455

  Fly   394 DDFD--EEALERVHLLVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQ 456
            :||:  ::|..||.....|.:  |.|..:.|.        :.:|.:.:.|:.::..:|....||:
plant   456 EDFESIQDAQNRVAAFALHKL--FSDLPVHFA--------ITEPYASLVLIWKQEESLGITSREE 510

  Fly   457 KERRK-----AQKKHWELSGTKLGNIMGVQR----PQDEDDMRFDKEKDKADYRKDQKFADHMRD 512
            :.|.|     .:..::.|:.|..|....:..    .::.||:...|...:|  |::...|.....
plant   511 QRREKFVESLLEADNFSLTTTSRGIHSALPMVDSCVKENDDLDVVKSNHRA--RRNSSMAAECSS 573

  Fly   513 --QDTGGKSDFSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHED- 574
              |....|....:.|.:.:.|..||:...::::|..::|..|:::.||||||||||:.|::.:| 
plant   574 LKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDM 638

  Fly   575 ------GYSKRGMIGCTQPRRVAAMSVAKRVSDE-MDTQLGED---VGYAIRFEDCTSERTVIKY 629
                  ||..   |.|||||   |::||:||:|| .:...|.|   |.|.:|.::..|::|.:.:
plant   639 IDSGHGGYCN---IICTQPR---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLF 697

  Fly   630 MTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRH------DLKLIVTSAT 688
            .|.|||||:.:.|..|...:.||:||.|||||..|.|..:|:.::.::.      .||:|:.|||
plant   698 CTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSAT 762

  Fly   689 MDSSKFATFFGNVPTFTIPGRTFPVDVMF------------------------------------ 717
            :|:.:|:.:||..|..|..|||.||...|                                    
plant   763 VDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAALSSDTSITDKLGSVNVP 827

  Fly   718 --------------------SKNTCED---YVESAV-----KQALQVHL--TPNEGDMLIFMPGQ 752
                                |.||..|   |:.|||     .:.|..|:  |..||.:|:|:||.
plant   828 RGKKNLMLAGWGDSYLVSEDSLNTSYDSIKYIASAVVDYDLLEELICHIDDTCEEGAILVFLPGM 892

  Fly   753 EDIEVTCEVLEERLA---EIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSL 814
            .:|    .:|..|||   ....|....:||::|.:.|..|.|:|.:...|:||.::||||||||:
plant   893 SEI----NMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSI 953

  Fly   815 TVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDE 879
            |::.::||||||..|...|||...:.::....:|:|||.||.|||||..||..:.|||:.:::..
plant   954 TIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKL 1018

  Fly   880 LLALTVPEIQRTNLANTVLLLKSLGVVDLLQF--HFMDPPPQDNILNSLYQLWILGALDHTGALT 942
            :....|||:.|..|....|.:|.||:..:..|  ..::||.:..|.:::..|..:|||:....||
plant  1019 MRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELT 1083

  Fly   943 TLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSV---PSIFYRPKGREDEADGVR---- 1000
            .||..:|:.|:|....:||:.....||.:.:|.|.:.||.   |.::.:.   |...|.|:    
plant  1084 PLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKD---EQNVDRVKLALL 1145

  Fly  1001 -EKFQRP--------ESDHLTYLNVYQQW----RQNNY--SSTWCNEHFIHIKAMRKVREVRQQ- 1049
             :|.:..        :||||..:..|::|    .:..:  :.::|...|::...||.:||.|.: 
plant  1146 SDKLESSSNLNNNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEF 1210

  Fly  1050 ---LKDI----------MTQQNLSVISCGIDW---------------DIVRKCICSAYFYQAARL 1086
               |.||          ..::|..|      |               ::|:..:|      |...
plant  1211 GMLLADIGLINLPKGKGRRKENFDV------WFSDKTQPFNMYSQEPEVVKAILC------AGLC 1263

  Fly  1087 KGIGEYVNLRTGMPC----------------HLHPTSA-------LYGLGTTPDYVVYHELIMTA 1128
            ..|.|.:..|...|.                |:|..|.       .|      .::|:.|.:.|.
plant  1264 PNIAEGLVNRLTKPAEETQRYAVWHDGKREVHIHRNSINKNCKAFQY------PFIVFLEKLETK 1322

  Fly  1129 K-EYMQCATAVDGYWLAELG 1147
            | .|:|..|.|..:.:...|
plant  1323 KVVYLQDTTVVSPFSILLFG 1342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp16NP_572947.1 HrpA 534..>1148 CDD:441249 221/777 (28%)
AT1G58050NP_176102.1 HrpA 595..>1122 CDD:441249 175/536 (33%)
OB_NTP_bind 1254..1345 CDD:400182 20/101 (20%)

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