DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp16 and AT1G48650

DIOPT Version :10

Sequence 1:NP_572947.1 Gene:Prp16 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001154411.1 Gene:AT1G48650 / 841287 AraportID:AT1G48650 Length:1206 Species:Arabidopsis thaliana


Alignment Length:983 Identity:269/983 - (27%)
Similarity:437/983 - (44%) Gaps:183/983 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 SLDLWEEEQRRLDREWYNIDEGYDDENNPFGGPNSEYFR-KREEQLEQKRTKRISAQQRQNNRDN 373
            :|..::.:.....|..||..|..|:.:...|...|:... ...:.::|.|.|  .....:|..|.
plant    89 NLPYFQRQNSGYGRIAYNDYESSDESDRDVGSSQSQQMAGSTLDNIDQWRFK--LTMLLRNKEDQ 151

  Fly   374 ELWERNRMLTSGVVTLISVNDDFDEEALERVHLLVHHIIPPFLDGR-----IVFTKQP----EPV 429
            |:..|.|          ....|||..:.....:.:|        .|     :|.:|.|    .|.
plant   152 EVVSRER----------KDRRDFDHISALATRMGLH--------SRQYSKIVVISKAPLPNYRPD 198

  Fly   430 VPVKDPTSDMAL---LARKGSALVRNYREQKE-------RRKAQKK------HWELSGTKLGNIM 478
            :..|.|..::.|   |..:..|.:.::.:||:       |:.:.:.      ::|...|.:.|.:
plant   199 LDDKRPQREVVLPFGLQSEVDAHLHSFLDQKKTLIPEMPRQNSSESLANGYGNYETPETVMQNSL 263

  Fly   479 GVQRPQDEDDMRFDKEKDKADYRKDQKFADHMRDQDTGGKSDFSRKKTISEQRRFLPVFASRQEL 543
            ..:|......::...        |.|::.|....|...|            .|:.||.:..:..|
plant   264 ARERILRPRSLQLKS--------KQQQWVDSPEGQKMVG------------FRKTLPAYKEKDAL 308

  Fly   544 LNVIRENSVIIIVGETGSGKTTQLTQYLHEDGY-SKRG---MIGCTQPRRVAAMSVAKRVSDEMD 604
            |..|..|.|:::.||||.||||||.||:.|... :.||   .|.||||||::|:||::||:.|..
plant   309 LKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSERVAAERG 373

  Fly   605 TQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGL 669
            .|:||.|||.:|.|......|.:.:.|.|:|||..|.|..|...:.:::||.|||.::.|.|..:
plant   374 EQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIV 438

  Fly   670 LREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMF-------------SKNT 721
            |::::.||.|||||:.|||:::..|:::||..|...|||.|:||...|             :.|.
plant   439 LKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQ 503

  Fly   722 CEDY--------------------VESAVKQALQV------------------------------ 736
            .:||                    :.|||:.||:.                              
plant   504 IDDYGEEKTWKMQKQAQFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENV 568

  Fly   737 --HLTPNE--GDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSS 797
              |:...|  |.:|:||.|.:||......||.. :.:.:...:.:|..:..:.|..|..||.:..
plant   569 LCHIVKGERPGAVLVFMTGWDDINSLKNQLEAH-SLLGDPNKVLLLACHGSMASSEQRLIFDRPP 632

  Fly   798 DGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYP------ISQANANQRS 856
            :|:||.|:|||:||||:|::.::||||.|..|...|      |||...|      ||:|.|.||.
plant   633 EGIRKIVLATNMAETSITINDVVYVIDCGKAKETSY------DALNNTPCLLPSWISKAAARQRR 691

  Fly   857 GRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQF--HFMDPPPQ 919
            |||||..||:.|.||.:..| :.......||:.||.|.:..|.:||||:..:.:|  ..:.||..
plant   692 GRAGRVMPGECYHLYPRCVY-EAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEA 755

  Fly   920 DNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPS 984
            .::.|::..|.|:||||....||.||:.::..|::|...:|||:.....|...|:.:|:.|||..
plant   756 LSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRD 820

  Fly   985 IFYRPKGREDEADGVREKFQ-RPESDHLTYLNVYQQWR-----QNNYSSTWCNEHFIHIKAMRKV 1043
            .|..|..::|.|:..|.||. |..|||||.:..|..|:     .:.|...|.|  |:..:.::.:
plant   821 PFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKN--FLSSQTLKAM 883

  Fly  1044 REVRQQLKDIMTQQNL--SVISC---GIDWDIVRKCICSAYFYQAARLKGIGEYVNLRT---GMP 1100
            ..:|:|..:::.:.:|  ::..|   ..|..:||..||:..|.....:....:.:.|:|   |..
plant   884 DSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQV 948

  Fly  1101 CHLHPTSALYGLGTTP-DYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKESGRSGREKK 1164
            . |:.:|....:...| .::|:::.:.....:::.:|||....|...|.   .:...|..|    
plant   949 L-LYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGD---KISSGGFDG---- 1005

  Fly  1165 KQAAEHLK 1172
                 |||
plant  1006 -----HLK 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp16NP_572947.1 HrpA 534..>1148 CDD:441249 220/707 (31%)
AT1G48650NP_001154411.1 HrpA 299..>822 CDD:441249 180/530 (34%)
OB_NTP_bind 916..998 CDD:400182 17/85 (20%)
DSRM_SF 1106..1160 CDD:380679
Blue background indicates that the domain is not in the aligned region.

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