DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prp16 and AT5G14900

DIOPT Version :10

Sequence 1:NP_572947.1 Gene:Prp16 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_196994.1 Gene:AT5G14900 / 831342 AraportID:AT5G14900 Length:301 Species:Arabidopsis thaliana


Alignment Length:302 Identity:112/302 - (37%)
Similarity:167/302 - (55%) Gaps:19/302 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   891 TNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDP 955
            ||||||||.||.|.|.:|::|..:|.|..|.:..:|..|:.|||||....||..|..|:||||||
plant     2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSEFPLDP 66

  Fly   956 PQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGR-EDEADGVREKFQRPESDHLTYLNVYQQ 1019
            ...:||||:.:..||.|:|.|.:|||||:.|.||:|. :..||..:..|...:.||||.||::..
plant    67 QMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGDHLTLLNLFHA 131

  Fly  1020 WRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDI------VRKCICSA 1078
            :.|||....||...||:.:||:....||:||..||.:..:.:  |..|::.      :||.:.:.
plant   132 FLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKL--CSPDFNSRDYYVNIRKALLAG 194

  Fly  1079 YFYQAARLKGIGEYVNLR--TGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGY 1141
            ||.|.|.|:..|.|:..|  .....||||::.   |...|::|||:|.:.|::.:::..|.:.|.
plant   195 YFMQVAHLERTGHYLTFRDKDDQVVHLHPSNC---LDHKPEWVVYNEYVFTSRNFIRTVTHIRGE 256

  Fly  1142 WLAELGPMFFSVKESGRSGREKKKQAAEHLKE---MEEQMLK 1180
            ||.::.|.::.:.....|  |.|:....|.|:   .||:..|
plant   257 WLVDVAPHYYKLANFPSS--EAKRVLERHYKKRKLSEERSCK 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp16NP_572947.1 HrpA 534..>1148 CDD:441249 103/265 (39%)
AT5G14900NP_196994.1 PRK11131 <2..>267 CDD:182986 104/269 (39%)
HA2 36..125 CDD:461295 41/88 (47%)

Return to query results.
Submit another query.