DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp16 and AT5G10370

DIOPT Version :10

Sequence 1:NP_572947.1 Gene:Prp16 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_196599.2 Gene:AT5G10370 / 830901 AraportID:AT5G10370 Length:1775 Species:Arabidopsis thaliana


Alignment Length:1006 Identity:289/1006 - (28%)
Similarity:462/1006 - (45%) Gaps:198/1006 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 SGGSRRNHGRQDDTVRPTPAHRYNQWAHGRKRSGATPWGEDPESLDLWEEEQRRLDREWYNIDEG 331
            |.|.|....|:..:...:..:|||    .|....:.|....|    .|.::..:....  |....
plant     8 SDGGRSATDRRQQSSHSSSTNRYN----SRSAQSSPPLNHRP----TWNQQHSQYPNS--NFPPN 62

  Fly   332 YDDENNPFGGPNSEYFRKREEQLEQKRTKRISAQQRQNNRDNEL-WERNRMLTSGVVTLISVNDD 395
            |..:.||..|.:....|.|...:.|      .......|.|.:| :...:.....:..|..:.: 
plant    63 YRRDRNPSSGYSPPVTRARPNFIVQ------LLHPAAANSDTKLCFSTKKQEIESLALLCEIPE- 120

  Fly   396 FDEEALERVHLLVHHIIPPF--------------------------LDGRIVFTKQ--PEPVVP- 431
                  |.:|      :|.|                          |.|:..|..:  |..:|| 
plant   121 ------ESIH------VPQFGCIAGSFSFRQWVDARSAVVALWDYRLQGKHEFVPELIPNVIVPS 173

  Fly   432 ----VKDPTSD------MALLAR-KGSALVRNYREQK------------------ERRKAQKKHW 467
                :||...|      ::|:.. :|...||...|:|                  |::||.:...
plant   174 DMNELKDRLRDLFSSHILSLMENGEGVKKVRLEIEEKSRQVVSFSSKRGLKFEVFEKKKAIEAER 238

  Fly   468 ELSGTKLGNIMGVQRP-------QD--EDDMRFDKEKDKADYRKDQKFADHMRDQDTGGKSDFSR 523
            :|...:|.......:.       ||  |.|:..::|.|.|.:..:             |..|:.|
plant   239 DLVVNRLEEFNNAMKSILRYLIGQDGYEFDLDDEEEGDVAVFCLE-------------GAYDWRR 290

  Fly   524 KKTI--SEQRRF---LPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIG 583
            ...:  .|.||.   ||::|.|:::|..|....:::::|||||||:|||.|:|.:.|.:....|.
plant   291 IHCLIRRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIV 355

  Fly   584 CTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTV---------------IKYMTDG 633
            |||||::|||::|.||.:|.              ..|..|.||               :.||||.
plant   356 CTQPRKIAAMTLADRVREES--------------SGCYEENTVSCTPTFSSTEEISSKVVYMTDN 406

  Fly   634 ILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFF 698
            .||:..::|..|...|.:|:||||||||:||:|..||:::::||.||:|::.|||.|:.:.:.:|
plant   407 CLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYF 471

  Fly   699 GNVPTFTIPGRTFPVDVMFSKNTCED---------YVESAVKQALQVHLTPNEGDMLIFMPGQED 754
            .:.....:.||.|||::::|.:..|:         ||...||.|:::|.|..||.:|.|:..|.:
plant   472 FSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAE 536

  Fly   755 IEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGI 819
            :|..|    ||..    .|:...||::.:|..:.|.::|| :..|.||.:.||||||||||:.|:
plant   537 VEWAC----ERFI----TPSAIALPLHGKLSFEEQFRVFQ-NHPGRRKVIFATNIAETSLTIPGV 592

  Fly   820 IYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALT 884
            .||||||..|...|.||.||..|::..:||::|.||:||||||.||:.||||::..: |.:....
plant   593 KYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDF-DSMNLNQ 656

  Fly   885 VPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGA-LDHTGA--LTTLGR 946
            .|||:|.:|...:|.:.:|||.::.:|:|:|.|..:.|..::..|..||| ::..|.  ||..|.
plant   657 EPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGH 721

  Fly   947 QMAEFPLDPPQCQMLIVAC---RMGCSAEVLIIVSMLSVPSIFYRPKGRED--EADGVREKFQRP 1006
            .:.:..|: |:...||:.|   |||....||..| |.:..|||.|....:|  :||.::.:|...
plant   722 CLVKLGLE-PKLGKLILGCFRHRMGKEGIVLAAV-MANASSIFCRVGNFDDKMKADRLKVQFCNQ 784

  Fly  1007 ESDHLTYLNVYQQW------RQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCG 1065
            ..|..|.|:||::|      |:|.    ||.|:.::.|:||:..:..::| :|..::.|:::|..
plant   785 NGDLFTLLSVYKEWASLPRERRNK----WCWENSLNAKSMRRCEDTVKEL-EICIERELTLVSPS 844

  Fly  1066 IDW-----------DIVRKCICSAYFYQAARLKGIGE--YVNLRTGMPCHLHPTSALYGLGTTPD 1117
            . |           ..::..|.::.....|...|..:  |....||....|||:.:|...|..|.
plant   845 Y-WVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPS 908

  Fly  1118 YVVYHELIMTAKEYMQCATAVDGYWLAELGP 1148
            :||:.||:....:|:.|.||.|...|..|.|
plant   909 WVVFGELLSIVDQYLVCVTACDFEALYMLDP 939

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp16NP_572947.1 HrpA 534..>1148 CDD:441249 228/664 (34%)
AT5G10370NP_196599.2 HrpA 304..>756 CDD:441249 177/477 (37%)
OB_NTP_bind 860..937 CDD:400182 22/76 (29%)
RING_Ubox 1561..>1591 CDD:473075
BRcat_RBR 1646..1699 CDD:438996
Rcat_RBR_DEAH12-like 1718..1768 CDD:439036
Blue background indicates that the domain is not in the aligned region.

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