DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and AT4G18465

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_567558.2 Gene:AT4G18465 / 827579 AraportID:AT4G18465 Length:695 Species:Arabidopsis thaliana


Alignment Length:656 Identity:267/656 - (40%)
Similarity:419/656 - (63%) Gaps:25/656 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   527 ISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRG-MIGCTQPRRV 590
            |.:||:.|||:..|.|:|.::..::..|||||||||||||:.|||.|.|:::.| :|.||||||:
plant    41 IEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRL 105

  Fly   591 AAMSVAKRVSDEMDTQLGEDVGYAIRFED-CTSERTVIKYMTDGILLRESLRDPELDSYSAIIMD 654
            |..:|:.||::||...|||:|||.||||| .||..|.:|::|||:|:||.:.||.|..||.|::|
plant   106 AVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMID 170

  Fly   655 EAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFF----------GNVP------- 702
            ||||||:|||:|.|||::|..||.:|:||::|||:::...:.||          |:.|       
plant   171 EAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHAPEGSTPGPKLEPA 235

  Fly   703 TFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERL- 766
            ..::.||.|.|.:.:.:....||:.|.|...|.::.....||:|:|:.||||||...::|||.. 
plant   236 ILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPGDVLVFLTGQEDIETAIKLLEEEAH 300

  Fly   767 AEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLK 831
            :...|:..|..||:||.|....|..||..:..|.||.:::|||||||||::|::||||||:.|.|
plant   301 SNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQK 365

  Fly   832 VYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANT 896
            .|||...:::|.:.|||:|:|.||||||||..||:.|||||:..:.:::....:||:||:||.:|
plant   366 FYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVST 430

  Fly   897 VLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTT-LGRQMAEFPLDPPQCQM 960
            |:.||:||:.::|.|.:..||..:.::.:|..|:.|..||....||: .|.|:||.||||...:|
plant   431 VIQLKALGIDNILGFDWPAPPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKM 495

  Fly   961 LIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNY 1025
            ::.:..:|||.|::.|.::|||.|::...:|.:.|.|..:.:|...|.||:|:||||:.:.::..
plant   496 ILASSELGCSHEIITIAAVLSVQSVWIIARGVQKEQDEAKLRFAAAEGDHVTFLNVYKGFLESKK 560

  Fly  1026 SSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLK--G 1088
            .:.||.::|::.::|:||.|:|.|||.|..:..:::.||..|.:.|||.:.:.:|..|.||:  .
plant   561 PTQWCYKNFLNYQSMKKVVEIRDQLKRIARRLGITLKSCDGDMEAVRKAVTAGFFANACRLEPHS 625

  Fly  1089 IGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSV 1153
            .|.|..:|.....::||:|.|:.:  .|.:|||..::.|.::||:....::..||.|:.|.|:..
plant   626 NGVYKTIRGSEEVYIHPSSVLFRV--NPKWVVYQSIVSTERQYMRNVVTINPSWLTEVAPHFYQN 688

  Fly  1154 KESGRS 1159
            :::..|
plant   689 RQNAMS 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 98/204 (48%)
DEXDc 551..689 CDD:238005 81/139 (58%)
HELICc 722..870 CDD:238034 69/148 (47%)
HA2 932..1014 CDD:214852 31/82 (38%)
OB_NTP_bind 1048..1148 CDD:285018 31/101 (31%)
AT4G18465NP_567558.2 HrpA 41..683 CDD:224557 264/643 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.680

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