DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(1)G0007 and AT4G16680

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001329688.1 Gene:AT4G16680 / 827370 AraportID:AT4G16680 Length:796 Species:Arabidopsis thaliana


Alignment Length:765 Identity:338/765 - (44%)
Similarity:487/765 - (63%) Gaps:57/765 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 VRNYR-----------EQKERRKAQKKHWELSGTKLGNIMGVQRPQDEDDMRFDKEKDKADYR-- 501
            |..||           :||:|....|:.: ....:.|.::..|...:      |.:..||..|  
plant    26 VEGYRFPDAYDQEGCIDQKKRFDVAKERY-CERRRSGRVVTEQEAWE------DHQAQKARVRFG 83

  Fly   502 -KDQK---------------FADHMRDQDTGGKSDFSRKKTISEQ----RRFLPVFASRQELLNV 546
             ||:|               |.:...:.:| ||......||.:|:    |.|||:...|:|||.:
plant    84 AKDKKQVVDGYEFVFDDLTGFVEESSEAET-GKHRGCYSKTAAEKAREGREFLPIHGYREELLKL 147

  Fly   547 IRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDV 611
            |.||.|::||||||||||||:.|||.|.||:|||.|||||||||||||||.||:.|:..:||.:|
plant   148 IEENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAMSVASRVAQEVGVKLGHEV 212

  Fly   612 GYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVAR 676
            ||:|||||||||:|||||||||:||||.|.:|:|||||.||:||||||:||||:||.|::::...
plant   213 GYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKV 277

  Fly   677 RHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPN 741
            |.||:||::|||:::.||:.:|.:...:.||||.:||:.:|.|....||:|:.::..:|:|.|..
plant   278 RPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLETVIRTVVQIHQTEA 342

  Fly   742 EGDMLIFMPGQEDIEVTCEVLEERLAEI-DNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVV 805
            .||:|:|:.|||:||.....|:.|:.:: .....:.|.||||.||:.||||:|:.:..|.||.|:
plant   343 IGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVL 407

  Fly   806 ATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRL 870
            ||||||||||:||:.||||.||||:..||||.||::|.:.|||:|:|.||:||:||||||:.:||
plant   408 ATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRL 472

  Fly   871 YTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGAL 935
            |..:    :|...|:|||||.|||:.||.|||||:.|:..|.||||||::.:|.:|..|:.||||
plant   473 YNIK----DLEPTTIPEIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYALGAL 533

  Fly   936 DHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSV-PSIFYRPKGREDEADGV 999
            |..|.:|.:|.:|.|||:||...:|::.:.:..||.|::.|.:|||| .|:|||||.::..||..
plant   534 DEIGEITKVGERMVEFPVDPMLSKMIVGSEKYKCSKEIITIAAMLSVGNSVFYRPKNQQVFADKA 598

  Fly  1000 REKFQRPE---SDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSV 1061
            |..|....   .||:..|.||..|::.|||:.||.|.||..|:|::.|::|.||..::.:..:.:
plant   599 RMDFYEDTENVGDHIALLRVYNSWKEENYSTQWCCEKFIQSKSMKRARDIRDQLLGLLNKIGVEL 663

  Fly  1062 ISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIM 1126
            .|...|.|.::|.|.:.:|..:|:|:..|.|..::.....::||.|.|:| .:...::|||||::
plant   664 TSNPNDLDAIKKAILAGFFPHSAKLQKNGSYRRVKEPQTVYVHPNSGLFG-ASPSKWLVYHELVL 727

  Fly  1127 TAKEYMQCATAVDGYWLAELGPMFFSVKESGRSGREKKKQAAEHLKEMEE 1176
            |.||||:..|.:...||.|:.|.::.:|:. ...|.||.|     :.:||
plant   728 TTKEYMRHTTEMKPEWLIEIAPHYYKLKDI-EDTRPKKTQ-----RRIEE 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 118/189 (62%)
DEXDc 551..689 CDD:238005 96/137 (70%)
HELICc 722..870 CDD:238034 75/148 (51%)
HA2 932..1014 CDD:214852 35/85 (41%)
OB_NTP_bind 1048..1148 CDD:285018 31/99 (31%)
AT4G16680NP_001329688.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

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