DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and AT2G47250

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_182247.1 Gene:AT2G47250 / 819338 AraportID:AT2G47250 Length:729 Species:Arabidopsis thaliana


Alignment Length:693 Identity:308/693 - (44%)
Similarity:457/693 - (65%) Gaps:31/693 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 GKSDFSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHE----DGYS 577
            ||:...|...|.|:||.|||:..:.:.||.:..|..:|:|||||||||||:.|::.:    |...
plant    48 GKAYSQRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSD 112

  Fly   578 K--RGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESL 640
            |  :.::|||||||||||||::||:||||..:||:|||:||||||||.||::||:|||:||||::
plant   113 KGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177

  Fly   641 RDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFT 705
            .||.|:.|..||:||||||:|:||||||||:|::..|.||||:|.|||:::.||..:|...|...
plant   178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMK 242

  Fly   706 IPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEI- 769
            :|||..||::.:::....||:|:|::..:|:|:....||:|:|:.|:|:||..|..:.:.::.: 
plant   243 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLG 307

  Fly   770 DNAPALSILPIYSQLPSDLQAKIFQKSSDGL-------RKCVVATNIAETSLTVDGIIYVIDSGY 827
            |....:.::|:||.||..:|.|||..:...|       ||.||:|||||||||:|||:||||.|:
plant   308 DQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGF 372

  Fly   828 CKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTN 892
            .|.|||||||.:::|.:.|||:|:|:|||||||||.||:.:||||::.:.::|...|.|||.|:|
plant   373 AKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSN 437

  Fly   893 LANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQ 957
            ||||||.||.||:.||:.|.|||||..:.::.:|..|..|||||..|.||..|..|:||||||..
plant   438 LANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQM 502

  Fly   958 CQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQ 1022
            .:||||:....||.|:|.:.:|||||:.|.||:..:..||..:.:|...:.||||.||||..::|
plant   503 SKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ 567

  Fly  1023 NNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDI------VRKCICSAYFY 1081
            ||....||.|:|::.:||:....|||||..||::.||.:  |..|::.      :||.:.:.||.
plant   568 NNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKM--CSTDFNSRDYYVNIRKAMLAGYFM 630

  Fly  1082 QAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAEL 1146
            |.|.|:..|.|:.::.....||||::.   |...|::|:|:|.::|.:.:::..|.:.|.||.::
plant   631 QVAHLERTGHYLTVKDNQVVHLHPSNC---LDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDV 692

  Fly  1147 GPMFFSVKESGRSGREKKKQAAEHLKEMEEQMLKAQHEMEERK 1189
            ...::.:......   :.|:|.|.|.:..|   :.::|.:.||
plant   693 AQHYYDLSNFPNC---EAKRALEKLYKKRE---REKNESKNRK 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 107/191 (56%)
DEXDc 551..689 CDD:238005 88/143 (62%)
HELICc 722..870 CDD:238034 72/155 (46%)
HA2 932..1014 CDD:214852 39/81 (48%)
OB_NTP_bind 1048..1148 CDD:285018 32/105 (30%)
AT2G47250NP_182247.1 HrpA 40..711 CDD:224557 301/670 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.720

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