DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and dhx33

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001093527.3 Gene:dhx33 / 796505 ZFINID:ZDB-GENE-131127-77 Length:680 Species:Danio rerio


Alignment Length:640 Identity:270/640 - (42%)
Similarity:410/640 - (64%) Gaps:17/640 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   527 ISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVA 591
            :..|||.||::.||.::::.:|:....:.:||||||||||:.|||:|.|..::|:|..|||||||
Zfish    40 VEAQRRHLPIYQSRTQVISQLRQLHSAVFIGETGSGKTTQIPQYLYEAGIGRQGIIAITQPRRVA 104

  Fly   592 AMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEA 656
            |:|:|.||::|...|||:.|||.:||||.||..|.:|:||||:||||::.||.|..|:.:|:|||
Zfish   105 AISLAGRVAEEKKVQLGKLVGYTVRFEDVTSPETKLKFMTDGMLLREAIGDPLLLRYTVVILDEA 169

  Fly   657 HERSLSTDVLFGLLREIVARRHD-----LKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVM 716
            |||::.||||||:::....||.:     ||::|.|||||...|:.:|...|...:.||..|:.:.
Zfish   170 HERTVHTDVLFGVVKAAQRRRLEQNKIPLKVVVMSATMDVDLFSQYFNKSPVLYLEGRQHPIQIY 234

  Fly   717 FSKNTCEDYVESAVKQALQVHL-TPNEGDMLIFMPGQEDIEV---TCEVLEERLAEIDNAPALSI 777
            ::|....||:::|:....|:|. .|:..|:|:|:.|||:||.   ||..:.:.|.  |.:.::::
Zfish   235 YTKQPQSDYLQAALVSIFQIHQEAPSSHDILVFLTGQEEIEALARTCRDISKHLP--DTSGSMTV 297

  Fly   778 LPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDAL 842
            :|:|:.||...|.::|..:..|.||.:::|||||||:|:.||.||||:|..|.|.:||..|::.|
Zfish   298 VPLYASLPPAQQMRVFLPAPKGSRKVILSTNIAETSITISGIKYVIDTGMVKAKRFNPDSGLEVL 362

  Fly   843 QIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVD 907
            .:..:|:|.|.||:|||||...|..|||||:.:: :.|..:|||||||.|||:.||.|.:|||.|
Zfish   363 AVQRVSKAQAWQRAGRAGREDAGSCYRLYTEDEF-ENLANMTVPEIQRCNLASVVLQLLALGVPD 426

  Fly   908 LLQFHFMDPPPQDNILNSLYQLWILGALDHTG---ALTTLGRQMAEFPLDPPQCQMLIVACRMGC 969
            :|.|.|:..|..:::..::.||.||||:|...   :||.||::||.|||:|...:.|:::....|
Zfish   427 VLNFDFVSKPSPESMRTAVEQLCILGAVDRKDDHVSLTPLGKKMACFPLEPRFSKTLLISPDFSC 491

  Fly   970 SAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHF 1034
            :.|:|.|:|:|||.|:.|.|..|.||...||:||...|.||:|.||:|:.:::.:.:..||.|:|
Zfish   492 TEEILTIISLLSVDSVLYNPPARRDEVISVRKKFISSEGDHITLLNIYRAFKKVSGNKDWCRENF 556

  Fly  1035 IHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGM 1099
            ::.:.|..|.|||.||:||..:.||.:.|...|...||:|:....|..||.|:..|.||.|.|..
Zfish   557 VNSRNMGLVGEVRAQLRDICIKMNLKLESSVCDLANVRRCLAHGLFMSAAELQPDGSYVALDTHQ 621

  Fly  1100 PCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVK 1154
            |..:||:|.|:  ...|..|:::||:.|::.||:....:...||.|..|.:|..|
Zfish   622 PVSIHPSSVLF--QARPVCVLFNELLHTSRCYMRDLCLIQTDWLHEAAPEYFRRK 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 93/190 (49%)
DEXDc 551..689 CDD:238005 76/142 (54%)
HELICc 722..870 CDD:238034 60/151 (40%)
HA2 932..1014 CDD:214852 37/84 (44%)
OB_NTP_bind 1048..1148 CDD:285018 35/99 (35%)
dhx33NP_001093527.3 DEXDc 50..234 CDD:214692 88/183 (48%)
DEXDc 64..207 CDD:238005 76/142 (54%)
Helicase_C 264..381 CDD:278689 49/118 (42%)
HA2 451..536 CDD:214852 37/84 (44%)
OB_NTP_bind 570..670 CDD:285018 36/101 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.720

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