DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and dhx35

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001072515.1 Gene:dhx35 / 779970 XenbaseID:XB-GENE-5868299 Length:701 Species:Xenopus tropicalis


Alignment Length:662 Identity:281/662 - (42%)
Similarity:429/662 - (64%) Gaps:20/662 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 TISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRG-MIGCTQPRR 589
            :|..||:.||||..|..:|.::.....::|:||||.||:||:.|||.|.|::..| ::|.|||||
 Frog    44 SIEHQRQKLPVFKLRNHILYLVENYQTVVIIGETGCGKSTQIPQYLTEAGWTAEGRVVGVTQPRR 108

  Fly   590 VAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTS-ERTVIKYMTDGILLRESLRDPELDSYSAIIM 653
            |||:|||.||::|....||.:|||.|||:|||. :.|.||::|||:|:||.:.||.|..||.:::
 Frog   109 VAAVSVAGRVAEERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMSDPLLTRYSVLML 173

  Fly   654 DEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFG----NVPT------FTIPG 708
            ||||||:|.||:..|||:::..:|.||:|:|.|||:|:.||..||.    |.|:      .|:.|
 Frog   174 DEAHERTLYTDIAIGLLKKVQKKRGDLRLVVASATLDAEKFKAFFNQNDTNDPSRDTCAILTVEG 238

  Fly   709 RTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEER---LAEID 770
            ||||||:.::::...||::|.|:..:::|.:..|||:|.|:.|||::|....:|.|:   |:...
 Frog   239 RTFPVDIFYTQSPVPDYLKSTVQTVMKIHQSDLEGDILAFLTGQEEVESVVSMLVEQARILSRSG 303

  Fly   771 NAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNP 835
            ....|.:||:|:.||:..|.|:|::.|...||.||||||||.|:|::||.:|||.|:.||:.|:|
 Frog   304 MKKHLRVLPMYAGLPTSEQMKVFERVSHSARKVVVATNIAEASITINGISFVIDCGFVKLRAYDP 368

  Fly   836 RIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLL 900
            :..:::|.:.|:|||:||||:||:||...||.|||||:..:. :|...||||:||:|||..:|.|
 Frog   369 KRAVESLVVVPVSQASANQRAGRSGRNRSGQCYRLYTEEDFL-KLPPSTVPEMQRSNLAPVILQL 432

  Fly   901 KSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALD-HTGALTTLGRQMAEFPLDPPQCQMLIVA 964
            |:||:.::|:|||:.|||..:::.:|..|:.||.|| |......||.:||||||:|...:||:.:
 Frog   433 KALGIDNVLRFHFLSPPPAQSMVQALELLYALGGLDKHCRLTEPLGVRMAEFPLNPMFAKMLLES 497

  Fly   965 CRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTW 1029
            ...|||||:|.|.:|:.:.:||..|..::.:|.....||...|.||||.|||::.:.:.|.||.|
 Frog   498 GNFGCSAEILSIAAMMQIQNIFVVPPNQKSQAIREHRKFAVEEGDHLTMLNVFEAFIKFNKSSHW 562

  Fly  1030 CNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVN 1094
            |.:.|::.|.:.:...||:|||.::::..:...|...|.|.:.:||.|.:|..||:|...|.|..
 Frog   563 CQQRFLNYKGLMRAVTVREQLKKLLSKFKVPKNSSEGDPDPILRCIVSGFFANAAKLHSTGVYRT 627

  Fly  1095 LRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKESGRS 1159
            :|.|...::||||.||. ...|::|::.|::.|.|.||:..|||:..||.||.|.|:  ::....
 Frog   628 VRDGHELYIHPTSVLYA-EKPPNWVLFSEVVQTNKYYMRDVTAVESAWLLELAPHFY--QQGTHL 689

  Fly  1160 GREKKKQAAEHL 1171
            .|..|:...::|
 Frog   690 SRTSKRAKIDNL 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 97/197 (49%)
DEXDc 551..689 CDD:238005 74/139 (53%)
HELICc 722..870 CDD:238034 65/150 (43%)
HA2 932..1014 CDD:214852 35/82 (43%)
OB_NTP_bind 1048..1148 CDD:285018 37/99 (37%)
dhx35NP_001072515.1 HrpA 7..701 CDD:224557 280/660 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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