DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp16 and Dhx30

DIOPT Version :10

Sequence 1:NP_572947.1 Gene:Prp16 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001239612.1 Gene:Dhx30 / 72831 MGIID:1920081 Length:1223 Species:Mus musculus


Alignment Length:1142 Identity:278/1142 - (24%)
Similarity:451/1142 - (39%) Gaps:261/1142 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 DRSMSERSVHTPREPGTPGGSSGGISNSSWD---------------------------------- 235
            |.:.....|.:...|..||...|.:.|:|.|                                  
Mouse    44 DGTQEAAEVESEVAPSEPGEGDGSMVNASRDLLKEFPQPKNLLNSVIGRALGISHAKDKLVYVHT 108

  Fly   236 ------------------DEDGEFGQRKSD---------------WDMPTPRRHGNKSGDWSV-- 265
                              :.:| :|.:|.|               |.:..||.....:..:.|  
Mouse   109 NGPKKKKVTLHIKWPKSVEVEG-YGSKKIDAERQAAAAACQLFKGWGLLGPRNELFDAAKYRVLA 172

  Fly   266 -RSGGSRRNHGRQDDTVRPTPAHRYNQWAHGRKRSGATPWGEDPESLDLWEEEQRRLDREWYNID 329
             |.|....:..|.:.|:.||...:.|.       ....|.|....|..|..||:           
Mouse   173 DRFGSPADSWWRPEPTMPPTSWRQLNP-------ENIRPGGPAGLSRSLGREEE----------- 219

  Fly   330 EGYDDENNPFGGPNSEYFRKREEQLEQKR---TKRISAQQRQNNRDNELWERNRMLTSGVVTLIS 391
               :||               ||:||:..   |:.:|..|:.::        |.:..|...:...
Mouse   220 ---EDE---------------EEELEEGTIDVTEFLSMTQQDSH--------NPLRDSRGGSFEM 258

  Fly   392 VNDDFDEEALERVHL---LVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNY 453
            .:||....||.:..|   |:..:|.................|..|...:.:.||.......|...
Mouse   259 TDDDSAIRALTQFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLATLTLLWPCPMTFVAKG 323

  Fly   454 REQKERRKAQKKHWELSGTKLGNIMGVQRPQDE--------DDMRFDKEKDKAD---------YR 501
            |.:.|   |:.|...|:..||.::..|.|..:.        ..:|...|..:..         .|
Mouse   324 RRKAE---AENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILR 385

  Fly   502 KDQKFADH-----------MRDQ---------DTGGKSD-------------------------F 521
            |.:.|..|           :|.|         |:|..||                         :
Mouse   386 KIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSEAEEVRLSQSLLELW 450

  Fly   522 SRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHE----DGYSKRGMI 582
            .|:..|.::...|||...|..:|:.|.::.|::|.|:||.||||::.|.|.|    :|...|..:
Mouse   451 RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNV 515

  Fly   583 GCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSER-TVIKYMTDGILLRESLRDPELD 646
            ..|||||::|:|||:|||.|:...|..:||:.:|.|.....| ..:.:.|.|||||:...:|.|:
Mouse   516 IITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLE 580

  Fly   647 SYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTF 711
            ..|.:|:||.|||.::||.|..||:.:......|:|::.|||.|:.:|:.:||..|...:||..:
Mouse   581 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMY 645

  Fly   712 PV------DVMF---------------SKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDI 755
            ||      |::.               |::.|...::......|.:......|.:|.|:||.::|
Mouse   646 PVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEI 710

  Fly   756 EVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGII 820
            :...:.|:|.|...::  ...|||::|.:|...|..|||:...|:||.|:||||||||:||:.|:
Mouse   711 KGVQQRLQEALGMHES--KYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIV 773

  Fly   821 YVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTV 885
            :|:|||..|.:.|:.:..:..|:...:|:||..||.|||||...|.||.|: .|...::::...|
Mouse   774 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLF-PRSRLEKMVPFQV 837

  Fly   886 PEIQRTNLANTVLLLK----SLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGR 946
            |||.||.|.|.||..|    ....|:.|. ..:|.|....:..::..|..:|.||....|||||:
Mouse   838 PEILRTPLENLVLQAKIHMPEKTAVEFLS-KAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQ 901

  Fly   947 QMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPE-SDH 1010
            ::|....||...:.:::|....|...:|::||.|:........:.|. |.|.|:....... |||
Mouse   902 RLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSSSLQNRA-EVDKVKALLSHDSGSDH 965

  Fly  1011 LTYLNVYQ------QWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNL--SVISCGID 1067
            |.::....      :|:.......:..|:.::..::|.:..:.:|..:.:.:..|  ....|.:.
Mouse   966 LAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLP 1030

  Fly  1068 WDIVRKCICSAYFYQAARLKGI---GEYVNL---------RTGMPCHLHPTSALYGLGTTPDYVV 1120
                 ...|:.|..:...:||:   |.|.||         |.|   ...|.|..|  .|....::
Mouse  1031 -----SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQG---KFKPNSVTY--RTKSGNIL 1085

  Fly  1121 YHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKESG 1157
            .|:..:..:     ||.:...||.    .|.:||.:|
Mouse  1086 LHKSTINRE-----ATRLRSRWLT----YFMAVKSNG 1113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp16NP_572947.1 HrpA 534..>1148 CDD:441249 198/664 (30%)
Dhx30NP_001239612.1 HrpA 455..>987 CDD:441249 175/536 (33%)
OB_NTP_bind 1044..1131 CDD:400182 21/84 (25%)

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