DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(1)G0007 and dhx29

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:XP_697933.6 Gene:dhx29 / 553505 ZFINID:ZDB-GENE-130530-606 Length:1377 Species:Danio rerio


Alignment Length:1437 Identity:318/1437 - (22%)
Similarity:561/1437 - (39%) Gaps:391/1437 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EGTAGQETRGGLVIRKPKDAGAGGGGGFKVPQGSMLGLDKLAAKRRAEKERSERLISFKDSEFDD 77
            |.|..:|.:.    |.||..|...........||...:.|:..:...|| :..:||:....|:.|
Zfish    45 EKTTSKENKP----RAPKTYGLNANAQTDTNSGSDKSILKVIIQPELEK-KVIKLINDYRQEYAD 104

  Fly    78 TG--GGSSTPQ--ANASGASSEFAFKKPDTKSFEKLRGQLREHKDDTPSHT---GGVSEKARERL 135
            .|  .|..|.:  .:...|..:|.||              .||.::....:   ||....|.:.|
Zfish   105 KGPISGRLTSKKLLDLYTALQKFQFK--------------TEHIEEAMKSSVLYGGDLHSALDWL 155

  Fly   136 REHIQRDRKRGPVSSTAAEGRDRDRDWDRDRRRDRDRDRDRDRDRRQHRERERDRHRSWDRDRG- 199
            ..:::.|......|....|.:.:.|...:..:.||.:..:::   ::.:|.|:.:.::..:|.| 
Zfish   156 CLNLRDDELPEGFSQKMQEEKQKTRPKFQPLQEDRKQQGNKN---QEPKEEEKPKAKTPVKDDGG 217

  Fly   200 -------------RDRDRDRSMSERSVHTPR--EPGTPGGSSGGISNSSWDDED---------GE 240
                         .|:..|....|..||.|.  |...|......::...:|.::         .:
Zfish   218 SMKEWILRYAQQSEDQSSDEEQKEDIVHNPELDEKFDPNDRYLLLTAQLYDAKEMTTTSKAKKDK 282

  Fly   241 FGQRKS-------DWDMPTPRRHGNKSGDWSVRSGGSRRNHGRQDDTVRPTPAHRYNQWAHGRKR 298
            .|||.:       ..:|.|...|       .|.:...:         |:.||..        .|:
Zfish   283 MGQRAAQDRIRVIQQEMKTLESH-------PVFNTAIK---------VKDTPKE--------EKK 323

  Fly   299 SGATPWGEDPESLDLWE-------------EEQRRLDREWYNIDEGYDDENNPFGGPNSEYF--- 347
            :.....|::..:.:|:|             |::::..::..|    :|..:..:.|.:.:.|   
Zfish   324 AAVVTDGKEELNFNLFEQAEAAPAEKNAVAEKKKKEPKDIRN----FDYTSRSWTGKSPKQFLID 384

  Fly   348 --RKREEQLEQKRTKRISAQQRQNNRDNELWERNRMLTSGVVTLISVNDDFDEEALERVHL---- 406
              ||...:.......:::|        ...|:....:......|........|:.::..||    
Zfish   385 WCRKNLPKSPPPSFNKVAA--------GRYWKCKVRIQRPTDVLEVCPTILTEDGMQAQHLGATL 441

  Fly   407 ---------LVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQKERRKA 462
                     .||.::||                    ...|:.|..|.|        ||||..: 
Zfish   442 ALYNLVKGQSVHQLLPP--------------------TYRDVWLEWRDG--------EQKEEEQ- 477

  Fly   463 QKKHWELSGTKLGNIMGVQRPQDE----------DDMRFDKEKDKADYRKDQKFADHMRDQDT-- 515
                         .::.:.:|:|:          .......:.:.....:|.:..|...:.||  
Zfish   478 -------------TLLAINKPRDQFISRLLTRLKQQQSLQSQPEPQKLLQDAEPEDSWENLDTQE 529

  Fly   516 ----------GGKS-----DFSRK-----------KTISEQRRFLPVFASRQELLNVIRENSVII 554
                      ||.:     :.||:           :.:.::|:.||||..|:::|..:|.:.|::
Zfish   530 EQEPQCGAASGGPAGLVVEEASRRLLLKLQASPLARRLLDERKQLPVFQHREQVLEALRHHRVLV 594

  Fly   555 IVGETGSGKTTQLTQYLHED-----GYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGED---- 610
            |.|||||||:||:.|::.|:     ..::...:..|||||::|||:|.|||.|:.::.|..    
Zfish   595 IAGETGSGKSTQIPQFILEELLAAGDTAQPCSVVVTQPRRISAMSLACRVSQELGSEDGPGSMNS 659

  Fly   611 -VGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIV 674
             .||.||.|:.:||.|.:.|.|.|:|||:..:|..|:|.:.||:||.||||:.:|.|..:|:|:|
Zfish   660 LCGYQIRMENRSSEATRLLYCTTGVLLRKLQQDRHLNSLTHIIVDEVHERSVQSDFLLTILKEVV 724

  Fly   675 ARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCE---------------- 723
            .:|.||:||:.|||:|..|||.:|...|..:||||||||:|...::..|                
Zfish   725 HKRADLRLILMSATVDCQKFANYFNRCPVVSIPGRTFPVEVFHLEDIVEETGYVLEQDSEYSQKF 789

  Fly   724 ---------------------------------------DYVESAVKQALQVHLTPN-------- 741
                                                   |:..|..:..|| ::.||        
Zfish   790 VEEEEEVNIGITQKGGKTVQHQELIVRDSASGWDLGPELDHFSSRTRHILQ-YMNPNKINMDLIL 853

  Fly   742 ---------------EGDMLIFMPGQEDIEVTCEVL--EERLAEIDNAPALSILPIYSQLPSDLQ 789
                           :|.:|:|:||...|:...::|  ::|.:..|.   ..::.::|.|.|..|
Zfish   854 DLLAYLDKSPQFNAVDGAVLVFLPGLAHIQQLHDLLSTDKRFSSKDR---YKLVALHSSLSSQDQ 915

  Fly   790 AKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQ 854
            :..|.....|:||.|::||||||.:|:..:::|||:|..|...|:....|.:|....:|:|:|.|
Zfish   916 SSAFTVPPAGVRKIVLSTNIAETGVTIPDVVFVIDTGRTKENRYHESSQMSSLVEMFVSKASALQ 980

  Fly   855 RSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVL-LLK-SLGVVDLLQFHFMDPP 917
            |.|||||...|..:|||.:.:: :..:..::|||.|..|....| ::| ..|..:......:|.|
Zfish   981 RQGRAGRVREGFCFRLYPKFRF-ESFIDYSIPEILRVPLEELCLHIMKCEYGSPEDFLSRSLDAP 1044

  Fly   918 PQDNILNSLYQLWILGALDH-TGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLS 981
            .|..:.|::..|..:||... |..||.||..:|..|::....:|||.....||...:..|.:.:|
Zfish  1045 QQQAVCNAVSLLRRIGACQQDTHTLTPLGHHLAALPVNVKIGKMLIFGAIFGCLEPIATIAAAMS 1109

  Fly   982 VPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSST-----WCNEHFIHIKAMR 1041
            ..|.|..|..|::||:..:.......|||:|....|..||.:....|     :|..||::..|:.
Zfish  1110 EKSPFATPMSRKEEANLAKSALAVANSDHMTIYKAYLGWRSSRTEGTRAEMNYCRRHFLNRTALI 1174

  Fly  1042 KVREVRQQLKDIMTQ----------------------------QNLSVISCGID---WDIVRKCI 1075
            .:.||:|:|..::.|                            |::.|:...:.   :|.|.:.:
Zfish  1175 TIEEVKQELMRMVEQAGFVSSKLGRTPRPRPSTETKAPLSISTQDVCVVKATLTAGLYDNVGRIL 1239

  Fly  1076 CSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCAT---- 1136
            .|.......|:..:.|....:    .|:||:|....| .|..::::.|.:..:|.:::..|    
Zfish  1240 YSPSLDVQERVVCVVETAQGK----AHVHPSSVNRFL-QTHGWMLFQEKVKYSKVFLKDTTLISP 1299

  Fly  1137 -------------------AVDGYWLAELGPMFFSVKESGRSGREKKKQAAEHLKEMEEQMLKAQ 1182
                               ::|| |:....|:...|             ..:||:::.:.:|   
Zfish  1300 LSMLLFGGDIDVQHRERLISLDG-WICFQAPVRIGV-------------IFKHLRKLIDSLL--- 1347

  Fly  1183 HEMEERK 1189
                |||
Zfish  1348 ----ERK 1350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 87/195 (45%)
DEXDc 551..689 CDD:238005 64/147 (44%)
HELICc 722..870 CDD:238034 51/227 (22%)
HA2 932..1014 CDD:214852 26/82 (32%)
OB_NTP_bind 1048..1148 CDD:285018 22/153 (14%)
dhx29XP_697933.6 DEXDc 568..766 CDD:214692 87/197 (44%)
DEXDc 591..738 CDD:238005 63/146 (43%)
HELICc 841..996 CDD:238034 46/157 (29%)
HA2 1065..1140 CDD:214852 23/74 (31%)
OB_NTP_bind 1181..1309 CDD:285018 19/132 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.