DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and dhx33

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:XP_002932324.1 Gene:dhx33 / 447985 XenbaseID:XB-GENE-949473 Length:678 Species:Xenopus tropicalis


Alignment Length:644 Identity:269/644 - (41%)
Similarity:408/644 - (63%) Gaps:17/644 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 RKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQP 587
            :|.|:.||||.||::.:|.:::..:|:...::|:||||||||||:.|||:|....::.:|..|||
 Frog    34 KKMTVEEQRRSLPIYLARSQIIAQLRKLDSVVIIGETGSGKTTQIPQYLYEASIGRQSIIAVTQP 98

  Fly   588 RRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAII 652
            |||||:|:|.|||:|..|:|.:.|||.:||||.|||.|.||::|||:||||::.||.|..||.:|
 Frog    99 RRVAAISLATRVSEERRTELSKLVGYTVRFEDVTSEETKIKFLTDGMLLREAIGDPLLRKYSVVI 163

  Fly   653 MDEAHERSLSTDVLFGLLREIVARRHD-----LKLIVTSATMDSSKFATFFGNVPTFTIPGRTFP 712
            :||||||::.||||||:::....:|.:     ||:|:.|||||...|:.:|...|...:.||..|
 Frog   164 LDEAHERTIHTDVLFGVVKSAQKKRKEQEKQPLKIIIMSATMDVDLFSEYFNGAPVLYLEGRQHP 228

  Fly   713 VDVMFSKNTCEDYVESAVKQALQVHL-TPNEGDMLIFMPGQEDIEV---TCEVLEERLAEIDNAP 773
            :.:.::|.:..||:::|:....|||. .|...|:|:|:.|||:||.   ||..:.:.|.  |:.|
 Frog   229 IQIFYTKESQSDYLQAALVTVFQVHQEVPASHDILVFLTGQEEIEAMTKTCRDISKHLP--DDCP 291

  Fly   774 ALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIG 838
            .:.::|:|:.||...|.::||.:..|.||.:::|||||||:|:.||.||:|:|..|.|.|||..|
 Frog   292 KMVVMPLYASLPHSQQLRVFQNAPKGQRKVILSTNIAETSITIPGIKYVVDTGMVKAKKYNPESG 356

  Fly   839 MDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSL 903
            ::.|.:..:|:|.|.||:|||||...|..||||.:.:: ::...:|||||||.|||:.:|.|..|
 Frog   357 LEVLAVQKVSKAQAWQRTGRAGREDSGICYRLYKEEEF-EKFEEMTVPEIQRCNLASVMLQLLVL 420

  Fly   904 GVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTG---ALTTLGRQMAEFPLDPPQCQMLIVAC 965
            .|.::..|.||..|..|:|..::.||.:|||::..|   .||.||::||.|||:|...:.::::.
 Frog   421 RVPNVHTFDFMSKPSPDSIQAAIDQLHLLGAVERKGDQIVLTPLGKKMAAFPLEPKFSKTILLSP 485

  Fly   966 RMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWC 1030
            :..|:.|:|.|||:|||.|:.:.|..:.||....|:||...|.||:|.||:|:.::....:..||
 Frog   486 KFHCTEEILTIVSLLSVDSVLHNPASKRDEVQAARKKFISSEGDHITLLNIYRAFKNLGKNKDWC 550

  Fly  1031 NEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNL 1095
            .|:||:.:.|..|.|||.||:||..:.::.:.|...|...:|:|:....|..||.|:..|.|..:
 Frog   551 RENFINGRNMTMVLEVRSQLRDICIKLSMPMESSRTDTRNIRQCLAHGLFMHAAELQPDGTYTTV 615

  Fly  1096 RTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVK 1154
            .|..|..:||:|.|:  ...|..|||:||:.|:|.||:....||..||.|..|.:|..|
 Frog   616 DTHQPIAIHPSSILF--HCKPACVVYNELLHTSKCYMRDLCVVDADWLFEAAPDYFRRK 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 93/190 (49%)
DEXDc 551..689 CDD:238005 76/142 (54%)
HELICc 722..870 CDD:238034 63/151 (42%)
HA2 932..1014 CDD:214852 34/84 (40%)
OB_NTP_bind 1048..1148 CDD:285018 35/99 (35%)
dhx33XP_002932324.1 HrpA 38..667 CDD:224557 264/633 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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