DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and mle

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster


Alignment Length:1096 Identity:276/1096 - (25%)
Similarity:456/1096 - (41%) Gaps:295/1096 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 GSSG----GISNSSWDDEDGEFGQRKSDWDMPTPRRHGNKS----------GDWSVRSGGSRRNH 274
            |.||    |.:....:.:.|:.|.|.|..|....:|..|::          |:|::.:...|.|.
  Fly   112 GQSGPQDLGEAYRPLNHDGGDGGNRYSVIDRIQEQRDMNEAEAFDVNAAIHGNWTIENAKERLNI 176

  Fly   275 GRQDDTVRPTPAHRYNQWAHGRKRSGATPWGEDPE-------SLDLWEEEQRR------------ 320
            .:|.:.:|..  ::|            ||.|  ||       .|.::.....|            
  Fly   177 YKQTNNIRDD--YKY------------TPVG--PEHARSFLAELSIYVPALNRTVTARESGSNKK 225

  Fly   321 ---------LDREWY--NIDEGYDDENNPFGGPNSEYFRKREEQLEQKRTKRISAQQRQNNRDNE 374
                     |.|:.:  |:.|       ||.|...   :|::|||:....|              
  Fly   226 SASKSCALSLVRQLFHLNVIE-------PFSGTLK---KKKDEQLKPYPVK-------------- 266

  Fly   375 LWERNRMLTSGVVTLISVNDDFDEEALERVHLLVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDM 439
                   |:..::..|       :|.::.:.|       |.::.|.:..:...|.:|:      :
  Fly   267 -------LSPNLINKI-------DEVIKGLDL-------PVVNPRNIKIELDGPPIPL------I 304

  Fly   440 ALLARKGSALVRNYREQKERRKAQKK----------HW-----------ELSGTKLGNIMGVQRP 483
            ..|:|..|:       |::..|.|:.          :|           ||:.|.:         
  Fly   305 VNLSRIDSS-------QQDGEKRQESSVIPWAPPQANWNTWHACNIDEGELATTSI--------- 353

  Fly   484 QDEDDMRFDKEKDKADYRK-DQKFADHMRDQDTGGKSDFSRKKTISEQRRFLPVFASRQELLNVI 547
               ||:..|.|:...|.|: |.::...:                  |.|..||:.|.|.|:|..|
  Fly   354 ---DDLSMDYERSLRDRRQNDNEYRQFL------------------EFREKLPIAAMRSEILTAI 397

  Fly   548 RENSVIIIVGETGSGKTTQLTQYLHED-------GYSKRGMIGCTQPRRVAAMSVAKRVSDEMDT 605
            .:|.|:||.|.||.|||||:.||:.:|       ||:.   |..|||||::|:|||:||:.|...
  Fly   398 NDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYAN---IYVTQPRRISAISVAERVARERCE 459

  Fly   606 QLGEDVGYAIRFEDC-TSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGL 669
            |||:.|||::|||.. ......|.:.|.|:|||:  .:..|...|.||:||.|||.:::|.|..:
  Fly   460 QLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRK--LEAGLRGVSHIIVDEIHERDVNSDFLLVI 522

  Fly   670 LREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCE--DYVESA--- 729
            ||::|....||.:|:.|||:|::||:.:||..|...:|||.|||...|.::..:  |:|.||   
  Fly   523 LRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAESR 587

  Fly   730 ---------------------------------------------------VKQALQVHLTPNE- 742
                                                               :.:||.:|:.... 
  Fly   588 RKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNI 652

  Fly   743 -GDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVA 806
             |.:|:|:||...|....:.|:......|.: ...|||.:||:|.|.|.|:|:...:|:.|.:::
  Fly   653 PGAILVFLPGWNLIFALMKFLQNTNIFGDTS-QYQILPCHSQIPRDEQRKVFEPVPEGVTKIILS 716

  Fly   807 TNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLY 871
            |||||||:|:|.|::|||....::|::.....:.:......|:.|..||.|||||..||..:.|.
  Fly   717 TNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLC 781

  Fly   872 TQRQY---KDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHF----MDPPPQDNILNSLYQL 929
            ::.::   :|.|    .||:.||.|....|.:|.|.:..:  .||    ::|||.|.::.:...|
  Fly   782 SRARFQALEDNL----TPEMFRTPLHEMALTIKLLRLGSI--HHFLSKALEPPPVDAVIEAEVLL 840

  Fly   930 WILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPS-IFYRPKGRE 993
            ..:..||....||.|||.:|..|::|...:|:::....||:..:.|:.|..|..| :|....|:.
  Fly   841 REMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQR 905

  Fly   994 DEADGVREKFQRPESDHLTYLNVYQQWRQ-----NNYSSTWCNEHFIHIKAMRKVREVRQQLKDI 1053
            ..|:..:.......|||:..:...|.||:     .:..:.:|:...:.:..|..:.:.:|||.|:
  Fly   906 RLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDL 970

  Fly  1054 MTQQNL---SVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTT 1115
            :.|...   .:||..:|                .|:.|....:::...:.|          ||..
  Fly   971 LQQAGFPEECMISHEVD----------------ERIDGDDPVLDVSLALLC----------LGLY 1009

  Fly  1116 PDYVVYHE----LIMTAKEYMQCATAVDGYWLAELGPM-FFSVKESGRSGREKKKQ 1166
            |:..|:.|    |...:|..:...|:|:...||...|. ||...|..|:.....||
  Fly  1010 PNICVHKEKRKVLTTESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQ 1065

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 86/193 (45%)
DEXDc 551..689 CDD:238005 63/145 (43%)
HELICc 722..870 CDD:238034 52/205 (25%)
HA2 932..1014 CDD:214852 23/82 (28%)
OB_NTP_bind 1048..1148 CDD:285018 22/106 (21%)
mleNP_476641.1 DSRM 4..68 CDD:214634
DSRM 170..240 CDD:214634 14/85 (16%)
DEXDc 393..569 CDD:214692 79/180 (44%)
DEXDc 402..542 CDD:238005 63/144 (44%)
ATP-synt_B <584..644 CDD:304375 2/59 (3%)
Helicase_C 643..772 CDD:278689 44/129 (34%)
HA2 842..926 CDD:214852 23/83 (28%)
OB_NTP_bind 974..1078 CDD:285018 24/118 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468112
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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