DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp16 and Y108F1.5

DIOPT Version :10

Sequence 1:NP_572947.1 Gene:Prp16 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001361911.1 Gene:Y108F1.5 / 353490 WormBaseID:WBGene00022433 Length:147 Species:Caenorhabditis elegans


Alignment Length:143 Identity:51/143 - (35%)
Similarity:87/143 - (60%) Gaps:1/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   922 ILNSLYQLWILGALDHTGALTT-LGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSI 985
            ::|.|..|:.|||:|.|..||: ||.|||||||.|...:.|:.:...||..|::.||:|:.:..:
 Worm     1 MINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCFTEMVTIVAMMQIQDV 65

  Fly   986 FYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQL 1050
            |..|..:..:||.:|:||...|.:|:|.|||:.::.:|..|..||::||::.:.:.:...||.||
 Worm    66 FITPYRQRHQADVIRKKFAVEEGNHITMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQL 130

  Fly  1051 KDIMTQQNLSVIS 1063
            ..::.:..:..:|
 Worm   131 VRLLKRFEIEKVS 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp16NP_572947.1 HrpA 534..>1148 CDD:441249 51/143 (36%)
Y108F1.5NP_001361911.1 HA2 10..94 CDD:214852 34/83 (41%)

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