DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and CG32533

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001285437.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster


Alignment Length:603 Identity:204/603 - (33%)
Similarity:320/603 - (53%) Gaps:60/603 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   504 QKFADHMRDQ---------DTGGKSDFSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGET 559
            |:..|.|:.|         |......|.|.:.:.:.:|.||:...|::|...:..:.|:|:.|:|
  Fly   107 QEARDQMQSQFRHILLVYLDFRQTEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDT 171

  Fly   560 GSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSER 624
            |.||:||:.|||::.||..   |.||||||:|.:|:.|||:.|:....|..|.:.||||...::.
  Fly   172 GCGKSTQVPQYLYDFGYRS---IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKL 233

  Fly   625 TVIKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATM 689
            |.|.::|:|:|||:......||.|.|:|:||.|||:|..|.|.|:.:.::..|..||||:.|||:
  Fly   234 TNILFITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATI 298

  Fly   690 DSSKFATFFG--NVPTFTIPGRTFPVDVMF--------------SKNTCEDYVESA-VKQAL--- 734
            :...|..:||  ......:|||.||:.:.:              ||.:..:.::.| ..|.|   
  Fly   299 NVELFHGYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLI 363

  Fly   735 -QVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYS-QLPSDLQAKIFQKSS 797
             |.:.|...||:|||:.|..:||...|.:.|...|..:   ..:||::| |..:| |:|:|..:.
  Fly   364 DQQYPTSERGDVLIFVSGVNEIESVVEAVHEYATEQTH---WLVLPLHSGQAIAD-QSKVFDYAP 424

  Fly   798 DGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRT 862
            :|:|||:|:||||||||||||:.:|:|||..|...::.......|:.:.:|:::|:||.||||||
  Fly   425 EGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRT 489

  Fly   863 GPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLY 927
            |||..:||||..|| :...|...|||.|..|...:|.:.|:|:.|:..|.|::.|..:.|..::.
  Fly   490 GPGVCFRLYTAEQY-NAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQTIL 553

  Fly   928 QLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGR 992
            .|....||.....:|.|||.:|..|::....:||::........::|.:.:||||.:    |...
  Fly   554 ALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQN----PLTN 614

  Fly   993 EDEADG--VREKFQRPESDH---LTYLNVYQQWRQ----NNYSSTWCNEHFIHIKAMRKVREVRQ 1048
            ....|.  |||: :..||||   .|.:.:|..|.|    .:.:..||....|..:...:|.::||
  Fly   615 RAHTDQRCVRER-ESLESDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQ 678

  Fly  1049 QLKDIMTQQNLSVISCGI 1066
            |.:.|:.       |||:
  Fly   679 QFQRILE-------SCGM 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 75/187 (40%)
DEXDc 551..689 CDD:238005 61/137 (45%)
HELICc 722..870 CDD:238034 60/153 (39%)
HA2 932..1014 CDD:214852 25/86 (29%)
OB_NTP_bind 1048..1148 CDD:285018 6/19 (32%)
CG32533NP_001285437.1 DEXDc 155..327 CDD:214692 71/174 (41%)
DEXDc 163..298 CDD:238005 61/137 (45%)
Helicase_C 358..490 CDD:278689 55/135 (41%)
HA2 560..640 CDD:214852 25/84 (30%)
OB_NTP_bind <792..897 CDD:285018
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468109
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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