DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and Dhx9

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001382485.1 Gene:Dhx9 / 304859 RGDID:1308548 Length:1392 Species:Rattus norvegicus


Alignment Length:1024 Identity:254/1024 - (24%)
Similarity:414/1024 - (40%) Gaps:261/1024 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 GTPGGSSGGISNSSWDDEDG--EFGQRKSDWDMPTPRR----------HGNKSGDWSVRSGGSRR 272
            |....|..|....:||....  ::..||.:.::.....          |||    |::.:..:|.
  Rat   128 GVESSSGYGSPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGN----WTLENAKARL 188

  Fly   273 NHGRQDDTVRPTPAHRYNQWAHGRKRSGATPWGEDPESLDLWEEEQRRLDREWYNIDEGYDDENN 337
            |...|.:.::                      ||                   |...:...|.|.
  Rat   189 NQYFQKEKIQ----------------------GE-------------------YKYTQVGPDHNR 212

  Fly   338 PFGGPNSEYFRKREEQL---EQKRTKRISAQQRQNNRDNELWERNRMLTSGVVTLIS-------- 391
            .|....:.|.::...::   |....|:::||....:...:|:.      .||:...|        
  Rat   213 SFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYH------LGVIEAYSGLTKKKEG 271

  Fly   392 ---------VNDDFDEEALERVHLLVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGS 447
                     ::.|.:.:....|..|...|:||.:|          |.:||   ..::..||    
  Rat   272 ERVEPYKVFLSPDLELQLQNVVQELDLEIVPPPVD----------PSMPV---ILNIGKLA---- 319

  Fly   448 ALVRNYREQKERRKA-----------QKKHWELSGTKLGNIMGVQRPQDEDDMRFDKEKDKADYR 501
                 :.|..:|:.|           ....|..|....|.:......|...|:     |::..|:
  Rat   320 -----HFEPSQRQNAVGVVPWSPPQSNWNPWTSSNIDEGPLAYASTEQISMDL-----KNELAYQ 374

  Fly   502 KDQKFADHMRDQDTGGKSDFSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQ 566
            .:|   ||             ..:::.::|..|||.....|:|..|.:|||:||.|.||.|||||
  Rat   375 MEQ---DH-------------NLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQ 423

  Fly   567 LTQYLHEDGYSKRGMIGC----TQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSE-RTV 626
            :.||:.:|.........|    |||||::|::||:||:.|...:.|:..||::|||..... ...
  Rat   424 VPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHAS 488

  Fly   627 IKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDS 691
            |.:.|.|:|||:  .:..:...|.:|:||.|||.::||.|..:||::|....::::::.|||:|:
  Rat   489 IMFCTVGVLLRK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDT 551

  Fly   692 SKFATFFGNVPTFTIPGRTFPVDVMF--------------------------------------- 717
            :.|..:|.|.|...:.||||||...|                                       
  Rat   552 TMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDKEDDGGEDDDANCNLICG 616

  Fly   718 ---------------SKNTCEDYVESAVK--QALQVHLTPNEGDMLIFMPG-------QEDIEVT 758
                           .|.|..:.:|:.:|  :.|.|     .|.:|:|:||       |:.:|..
  Rat   617 DEYGPETKLSMSQLNEKETPFELIEALLKYIETLNV-----PGAVLVFLPGWNLIYTMQKHLENN 676

  Fly   759 CEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVI 823
            ......|         ..|||::||:|.:.|.|:|....||:.|.:::|||||||:|::.::|||
  Rat   677 SHFGSHR---------YQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVI 732

  Fly   824 DSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEI 888
            ||...|:|::.....|........|:.|..||.|||||..||..:.|.::.:: |.|.....||:
  Rat   733 DSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-DRLETHMTPEM 796

  Fly   889 QRTNLANTVLLLKSLGVVDLLQF--HFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEF 951
            .||.|....|.:|.|.:..:.||  ..::|||.|.::.:.:.|..|.|||....||.|||.:|:.
  Rat   797 FRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKL 861

  Fly   952 PLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADG-VREKFQRPE-SDHLTYL 1014
            |::|...:|:|    |||...|...|..:|..:.|..|...|.:..| :...|.... |||:..|
  Rat   862 PIEPRFGKMMI----MGCIFYVGDAVCTISAATCFPEPFISEGKRLGYIHRNFAGNRFSDHVALL 922

  Fly  1015 NVYQQWRQNNYSS-----TWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKC 1074
            :|:|.|.....|.     .:|.:..:::..:|...|.:.|||:|:       |:.|...|    |
  Rat   923 SVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEIL-------INSGFPED----C 976

  Fly  1075 ICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHE 1123
            :.:..|              ..||...:|....:|...|..|: |.||:
  Rat   977 LLTQVF--------------TNTGPDNNLDVVISLLAFGVYPN-VCYHK 1010

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 74/190 (39%)
DEXDc 551..689 CDD:238005 54/142 (38%)
HELICc 722..870 CDD:238034 51/156 (33%)
HA2 932..1014 CDD:214852 28/83 (34%)
OB_NTP_bind 1048..1148 CDD:285018 18/76 (24%)
Dhx9NP_001382485.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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