DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(1)G0007 and Dhx16

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_997661.1 Gene:Dhx16 / 294232 RGDID:1302963 Length:1044 Species:Rattus norvegicus


Alignment Length:1160 Identity:430/1160 - (37%)
Similarity:618/1160 - (53%) Gaps:200/1160 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KVPQGSMLGLDKLAAKRRA----EKERSERLISFKDSEFDDTGGGSSTPQANASGASSEFAFKKP 101
            |||:.:::.....||:|.|    ||.||.:|:  :|||        |..:|.|...||  ..||.
  Rat    69 KVPRKAVVEKPARAAEREARALLEKNRSYKLL--EDSE--------SGEEAVARDGSS--LQKKR 121

  Fly   102 DTKSFEKLRGQLREHKDDTPSHTGGVSEKARERLREHIQRDRKRGPVSSTAAEGRDRDRDWDRDR 166
            ..:...:.:.|..|.:::..|.:|                .||.|...|...|....:.:|:|  
  Rat   122 KRRKHLRKKQQEEEEEEEEASESG----------------KRKTGGSKSPTEEKPASEDEWER-- 168

  Fly   167 RRDRDRDRDRDRDRRQHRERERDRHRSWDRDRGRDRDRDRSMSERSVHTPREPGTPGGSSGGISN 231
                     .:|:|.|..| |||...  :|.|.||:||.|::.|||                 ..
  Rat   169 ---------TERERLQDLE-ERDAFA--ERVRQRDKDRTRNVLERS-----------------DK 204

  Fly   232 SSWDDEDGEFGQRKSDWDMPTPRRHGNKSGDWSVRSGGSRRNHGRQDDTVRPTPAHRYNQWAHGR 296
            .::::........:.|.....|.....           |||.:                      
  Rat   205 KAYEEAQKRLKMAEEDRKAMVPELRKK-----------SRREY---------------------- 236

  Fly   297 KRSGATPWGEDPESLDLWEEEQRRLDREWYNIDEGYDDENNPFGGPNSEYFRKREEQLEQKRTKR 361
                            |.:.|:.:|:    :::....||...||  :.|..|....:|:.||..|
  Rat   237 ----------------LAKREREKLE----DLEAELADEEVLFG--DVELSRHERRELKYKRRVR 279

  Fly   362 -ISAQQRQNNRDNELWERNRMLTSGVVTLISVNDDFDEEALERVHLLVHHIIPPFLDGRIVFTKQ 425
             ::.:.|......:|                       ||..|.|:      |....|      |
  Rat   280 DLAREYRAAGEQEKL-----------------------EATNRYHM------PKETRG------Q 309

  Fly   426 PEPVVPVKDPTSDMALLARKGSALVRNYREQKERRKAQKKHWELSGTKLG-NIMGVQRPQ----- 484
            |.....:.:..|.               ...:|:|:.::...:.:..|.| .....|.||     
  Rat   310 PARATDIVEEESG---------------APGEEQRRWEEARLDAASLKFGARDAAAQEPQYQLVL 359

  Fly   485 DEDD-MRFDKEKDKADYRKDQKFADHMRDQDTGGKSDFSRKKTISEQRRFLPVFASRQELLNVIR 548
            :||: :.|        .|..|...|..........:...:|::|...||.||||..|:|||..|.
  Rat   360 EEDETIEF--------VRAAQLQGDEEPSSGPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIA 416

  Fly   549 ENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGM-IGCTQPRRVAAMSVAKRVSDEMDTQLGEDVG 612
            .:.|:||.||||||||||:.|||.|:||:|:|| |.|||||||||||||.||:.||..:||.:||
  Rat   417 NHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVG 481

  Fly   613 YAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARR 677
            |:||||||||||||::|||||:||||.|.:|:|.|||.:::||||||:|.||:||||::::...|
  Rat   482 YSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 546

  Fly   678 HDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNE 742
            .:||::|.|||:|:::|:.||.:.|.|.||||.||||:.::|....||:|:.|...||:|:|...
  Rat   547 PELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPP 611

  Fly   743 GDMLIFMPGQEDIEVTCEVLEERLAEI-DNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVA 806
            ||:|:|:.|||:||..||:|::|...: .....|.:||||:.||||:||:|||.:..|.||.|||
  Rat   612 GDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVA 676

  Fly   807 TNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLY 871
            |||||||||::|||||:|.|:||.|.||||.||::|.:.|.|:|:||||:|||||...|:.:|||
  Rat   677 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLY 741

  Fly   872 TQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALD 936
            |...|:.||...||||||||:|.|.||||||||:.||:.|.|:||||.:.:|.:|.||:.||||:
  Rat   742 TAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALN 806

  Fly   937 HTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSV-PSIFYRPKGREDEADGVR 1000
            |.|.|||.||:|||.|:||...:|::.:.:..||.|:|.:.:|||| .|||||||.:...||..|
  Rat   807 HLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNAR 871

  Fly  1001 EKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCG 1065
            ..|..|..|||..||||.||.::.|||.||.|:|:..::||:.|:||:||:.::.:..:.:.||.
  Rat   872 VNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLTSCQ 936

  Fly  1066 IDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKE 1130
            .|:..|||.|.|.|||..|||...| |..::......:||.|:|:  ...|.:::||||::|.||
  Rat   937 GDYVRVRKAITSGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLF--EQQPRWLLYHELVLTTKE 998

  Fly  1131 YMQCATAVDGYWLAELGPMFFSVKESGRSGREKKKQAAEHLKEMEEQMLKAQHEM 1185
            :|:....::..||.|:.|.::..||          ....|.|:|.:::.|.:.|:
  Rat   999 FMRQVLEIESSWLLEVAPHYYKAKE----------LEDPHAKKMPKKVGKTREEL 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 116/186 (62%)
DEXDc 551..689 CDD:238005 91/138 (66%)
HELICc 722..870 CDD:238034 80/148 (54%)
HA2 932..1014 CDD:214852 41/82 (50%)
OB_NTP_bind 1048..1148 CDD:285018 34/99 (34%)
Dhx16NP_997661.1 DEXDc 402..584 CDD:214692 114/181 (63%)
DEXDc 419..558 CDD:238005 91/138 (66%)
HELICc 583..740 CDD:238034 82/156 (53%)
HA2 801..885 CDD:214852 41/83 (49%)
OB_NTP_bind 920..1018 CDD:285018 35/100 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.720

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