DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and SPAC20H4.09

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_593629.1 Gene:SPAC20H4.09 / 2542874 PomBaseID:SPAC20H4.09 Length:647 Species:Schizosaccharomyces pombe


Alignment Length:630 Identity:231/630 - (36%)
Similarity:382/630 - (60%) Gaps:27/630 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   530 QRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGY-SKRGMIGCTQPRRVAAM 593
            |::.||:...|.:||..:.:|.:.|::|.||.|||||:.|:|:|.|: |:.|:||||||||:.|.
pombe    21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVAK 85

  Fly   594 SVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHE 658
            ||::|||.|:::..|...||:|:|:...||:|.||||||||||.|...||.|:.||.:|:||.||
pombe    86 SVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSIVILDEVHE 150

  Fly   659 RSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFG--NVPTFTIPGRTFPVDVMFSKNT 721
            |:||||:|.|:|:.|:.:|:|.:|:::||::|::|.:.|||  .|.|.:|.|:.|||:.:|.:..
pombe   151 RTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKP 215

  Fly   722 CEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEI-DNAPALSILPIYSQLP 785
            .|:||:||::..:.::.|...||:|:|:.|:::||...:.:|:.|... ::...|..||:::.|.
pombe   216 TENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLT 280

  Fly   786 SDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQA 850
            .|.|.::|.......||.:.:|||||||:|:|||:||:|||:.|.::|||......|...|||::
pombe   281 VDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKS 345

  Fly   851 NANQRSGRAGRTGPGQAYRLYTQRQY---KDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFH 912
            :|.|||||||||..|:.:||||::.|   |:|..|    :|...:::..||.||.||:.::|||.
pombe   346 SAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEFEA----DILNCDMSPLVLFLKGLGLKNILQFP 406

  Fly   913 FMDPPPQDNILNSLYQLWILGALDHTGALT-TLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLII 976
            |...||..:::.:|..|::||.||.:|.|| .||.|::...||....:.|:.:.:.||:.|:|.|
pombe   407 FFVRPPTVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSI 471

  Fly   977 VSMLSVPSIFYRP-KGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAM 1040
            .|:|:...:||.| ...:::|......|...|.|.:|.|||::.:..|.....||.:::::.:.:
pombe   472 ASILTAGEVFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTL 536

  Fly  1041 RKVREVRQQLK------DIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGM 1099
            |:..::|..|.      .|.|.|.|....|    ..:.||:...:....|.|:..|.|..: .|.
pombe   537 RQALDIRTHLVRFLNKFSIPTAQRLPSSDC----SKILKCLLDGFVRNVAHLQNDGSYKTI-GGK 596

  Fly  1100 PCHLHPTSALYGLGTTPDYVVYHELIMTAKE-YMQCATAVDGYWL 1143
            ...|..:|.|:...|  .:::|...:.:..: :::..:.::.:||
pombe   597 QVWLDSSSVLHEKKT--PWIMYSSAVESETQIFVKNISKIESFWL 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 92/187 (49%)
DEXDc 551..689 CDD:238005 73/138 (53%)
HELICc 722..870 CDD:238034 59/148 (40%)
HA2 932..1014 CDD:214852 28/83 (34%)
OB_NTP_bind 1048..1148 CDD:285018 20/103 (19%)
SPAC20H4.09NP_593629.1 DEXDc 16..208 CDD:214692 91/186 (49%)
DEXDc 42..179 CDD:238005 71/136 (52%)
Helicase_C 221..356 CDD:278689 52/134 (39%)
HA2 426..510 CDD:214852 28/83 (34%)
OB_NTP_bind <569..639 CDD:285018 12/72 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.670

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