DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp16 and Dhx29

DIOPT Version :10

Sequence 1:NP_572947.1 Gene:Prp16 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_766182.2 Gene:Dhx29 / 218629 MGIID:2145374 Length:1365 Species:Mus musculus


Alignment Length:1394 Identity:318/1394 - (22%)
Similarity:563/1394 - (40%) Gaps:380/1394 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HRLEGTAGQETRGGLVIRKPKDAGAGGGGGFK---------VPQGSMLGLDKLAAKRRAEKERSE 65
            |:..|.|...........:..:|||.|....|         ||.|:          |....::..
Mouse     8 HKAPGAAAMRAAVSASRARSAEAGAVGEAQSKKPVARPAPAVPTGA----------REPRVKQGP 62

  Fly    66 RLISFKDSEFDDTGGGSSTPQANASGASSEFAFKKPDTKSFEKLRGQLREHK---DDTPSHTGGV 127
            ::.||..:  :|:||     .||...:..:...   :.|..:::.|.:.|||   .|..:.:|.:
Mouse    63 KIYSFNSA--NDSGG-----SANLDKSILKVVI---NNKLEQRIIGVINEHKKQNSDRGAISGRL 117

  Fly   128 SEKARERLREHIQ------RDRKRGPVSSTAAEGRDRDR--DWDRDRRRDRDRDRDRDRDRRQHR 184
            |.|..:.|...:|      :|.: ..:::|...|.|...  ||......|........::..:.:
Mouse   118 SAKKLQDLYMALQAFSFKTKDIE-DAMTNTLLHGGDLHSALDWLCLNLSDDALPEGFSQEFEEQQ 181

  Fly   185 ERERDRHRSW---------DRDRGRDRDRDRSMSERSVHTPREPGTPGGSSGGISNSSW------ 234
            .:.|.:.:|.         .:.:.:.::.|..:..:...|..|          ::...|      
Mouse   182 PKSRPKFQSVQIQATLSPPQQTKTKRQEEDPKIKPKKEETTVE----------VNMKEWILRYAE 236

  Fly   235 --DDE---DGEFGQRKSDWDMPTPR-----------------------RHGNKSGDWSVRSGGSR 271
              |:|   :|..|..:.:...|..|                       :.|.|.....:      
Mouse   237 QQDEEEKGEGSKGLEEEEKFDPNQRYLNLAARLLDAKEQAAAFKLEKNKQGQKEAQEKI------ 295

  Fly   272 RNHGRQDDTVRPTP--------AHRYNQWAHGRKRSGATPWGEDPESLDLWE------EEQRRLD 322
            |...|:.:|:...|        :|:.|:    :|:.......|...:|:|:|      ||::...
Mouse   296 RKFQREMETLEDHPIFNPAIKISHQQNE----KKKPAPATEAESALNLNLFEKSAAATEEEKGKK 356

  Fly   323 REWYNIDEGYDDENNPFGGPNSEYF-----RKREEQLEQKRTKRISAQQRQNNRDNELWE-RNRM 381
            :|.::: ..:|.....:.|.:.:.|     ||...:......::::.        ...|: |.|:
Mouse   357 KEPHDV-RNFDYTARSWTGKSPKQFLIDWVRKNLPKSPNPSFEKVAV--------GRYWKCRVRV 412

  Fly   382 LTSGVVTLISVNDDFDEEALERVHL-------------LVHHIIPPFLDGRIVFTKQPEPVVPVK 433
            :.|....|:.......|:.::..||             .||.::||                   
Mouse   413 VRSEDDVLVVCPTILTEDGMQAQHLGATLALYRLVKGQSVHQLLPP------------------- 458

  Fly   434 DPTSDMALLARKGSALVRNYR--------EQKERRKAQK----KHWELSGTKLGNIMGVQRPQDE 486
                              .||        |:|:|.:..|    |..:|...||.|.: .|:.|.:
Mouse   459 ------------------TYRDVWLEWSDEEKKREELNKMETNKPRDLFIAKLLNKL-KQQQQQQ 504

  Fly   487 DDMRFDKEKDKADYRKDQKFADHMRDQDTGG--------------KSDFSRKKT------ISEQR 531
            ...|.:.||..:: ..::.:.:.:.|:|...              :|.|.|.::      :.::|
Mouse   505 QQQRPESEKGGSE-DPEESWENLVSDEDLAALSLEPTSAEDLAPVRSLFRRLQSTPKYQRLLKER 568

  Fly   532 RFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHED------GYSKRGMIGCTQPRRV 590
            :.||||..|..::..::.:.|:::.|||||||:||:..:|.||      |..|..:: ||||||:
Mouse   569 QQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIV-CTQPRRI 632

  Fly   591 AAMSVAKRVSDEMDTQLGED-----VGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSA 650
            :|:|:|.||.:|:..:.|..     .||.||.|...||.|.:.|.|.|:|||:...|..|...|.
Mouse   633 SAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSH 697

  Fly   651 IIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDV 715
            :|:||.||||:.:|.|..:|:||:.:|.||.||:.|||:||.||:|:|.:.|...|.||::||:|
Mouse   698 VIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEV 762

  Fly   716 ------------MFSKNT--CEDYVE--------------------------------------- 727
                        :..|::  |:.::|                                       
Mouse   763 FHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGVKKYQEYIPVQSGASPELNPFYQK 827

  Fly   728 -SAVKQALQVHLTPN-----------------------EGDMLIFMPGQEDIEVTCEVL------ 762
             |:..|...:::.|:                       ||.:|||:||...|:...::|      
Mouse   828 YSSRTQHAILYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRF 892

  Fly   763 -EERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSG 826
             .||         ..::.::|.|.:..||..|.....|:||.|:|||||||.:|:..:::|||:|
Mouse   893 YSER---------YQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTG 948

  Fly   827 YCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRT 891
            ..|...|:....|.:|....:|:|:|.||.|||||...|..:||||:.:: :..|..:||||.|.
Mouse   949 RTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERF-EGFLDYSVPEILRV 1012

  Fly   892 NLANTVL-LLK-SLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALD-HTGALTTLGRQMAEFPL 953
            .|....| ::| .||..:......:|||....|.|::..|..:||.: :...||.||:.:|..|:
Mouse  1013 PLEELCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPV 1077

  Fly   954 DPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQ 1018
            :....:|||.....||...|..:.::::..|.|..|.||:||||..:......:|||||..|.|.
Mouse  1078 NVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYL 1142

  Fly  1019 QWR----QNNYSS--TWCNEHFIHIKAMRKVREVRQQLKDIMT---------------QQNLS-- 1060
            .|:    :..:.|  ::|..:|::..::..:.:|:|:|..::.               .|.||  
Mouse  1143 GWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSPSWEGRKGPQTLSFQ 1207

  Fly  1061 -------VISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPC---------HLHPTSAL 1109
                   |::.|: :|.|.|.:|:             :.|::...:.|         .:||:|..
Mouse  1208 DIALLKAVLAAGL-YDSVGKIMCT-------------KSVDVTEKLACMVETAQGKAQVHPSSVN 1258

  Fly  1110 YGLGTTPDYVVYHELIMTAKEYMQCATAV 1138
            ..| .|..:::|.|.:...:.|::..|.:
Mouse  1259 RDL-QTYGWLLYQEKVRYTRVYLRETTLI 1286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp16NP_572947.1 HrpA 534..>1148 CDD:441249 214/742 (29%)
Dhx29NP_766182.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..74 15/77 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..222 3/47 (6%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 235..257 4/21 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..524 4/24 (17%)
HrpA 570..>1226 CDD:441249 201/667 (30%)
DEAH box. /evidence=ECO:0000255|HAMAP-Rule:MF_03068 701..704 2/2 (100%)
OB_NTP_bind 1212..1298 CDD:400182 17/90 (19%)

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