DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp16 and Dhx8

DIOPT Version :10

Sequence 1:NP_572947.1 Gene:Prp16 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_659080.2 Gene:Dhx8 / 217207 MGIID:1306823 Length:1244 Species:Mus musculus


Alignment Length:1254 Identity:502/1254 - (40%)
Similarity:704/1254 - (56%) Gaps:204/1254 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 EKERSERLIS----------FKDS------EFDDTGGGS-----STPQANASGASSEFAFKKPDT 103
            :|:.:|.:||          ||.|      ||.|:...:     .|.:..|..::|:....||.|
Mouse    46 DKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKT 110

  Fly   104 KSFEKLR---------------------------GQLREHKDDTPSHTGGVSEKARERLREHIQR 141
            :. ||||                           ..|:|.:...||..|  .||.|:  .||..|
Mouse   111 EK-EKLRELFPVLCQPDNPSARTMLDEEDVKVAVDVLKELEALMPSAAG--QEKQRD--PEHRDR 170

  Fly   142 DRKRGPVSSTAAEGRDRDRDWDRDRRRDRDRDRDRDRDRRQHRERERDRHRSWDRDRGRDRDRDR 206
            .:|:     ..:..||||||.||||.||||||||||:||.:.|:|||||.|..:||..| |.|.|
Mouse   171 TKKK-----KRSRSRDRDRDRDRDRDRDRDRDRDRDKDRERDRDRERDRERDRERDHKR-RHRSR 229

  Fly   207 SMSERSVHTPREPGTPGGS---SGGISNSSWDD-EDGE-FGQRKSD-W-----DMPTPRRHGNKS 260
            |.|    |:.....|.|.|   |...|.|.:.| :|.| :|:|..| |     |.|.|....  .
Mouse   230 SRS----HSRTRERTKGKSRYRSRSRSQSPFKDRKDREKYGERNLDRWRDKHVDRPPPEEPA--I 288

  Fly   261 GD-------------WSVRSGGSRRNHGRQDDTVRPTPAHRYNQWAHGRKRSGATPWGEDPESLD 312
            ||             ..|:..|.|:   |.:..|..:...|     .||..:.|          |
Mouse   289 GDIYNGKVTSIMQFGCFVQLEGLRK---RWEGLVHISELRR-----EGRVANVA----------D 335

  Fly   313 LWEEEQR-----------RLDREWYNIDEGYDDENNP------FGGPNSEYFRK----------- 349
            :..:.||           :......::|:...::.||      .|..|.|...:           
Mouse   336 VVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLV 400

  Fly   350 -----REEQLEQKRTKRISAQQRQNNRDNELWERNRMLTSGVVT------------LISVNDDFD 397
                 .::.||:||..|||        |.|.||..:|:.:.|::            ::...||.:
Mouse   401 SAPEVEDDSLERKRLTRIS--------DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEE 457

  Fly   398 EEALERVHLLVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQKE-RRK 461
            :|.|| :.|:...  ||||.|....:....|:..||:|...::..|...|||.:..||.|: :|:
Mouse   458 DEDLE-IELVEEE--PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQRE 519

  Fly   462 AQ--------KKHW-----ELSGTKL-GNIMGV-QRPQDEDDMRFDKEKDKADYRKDQKFADHMR 511
            |:        .|||     :..|.:: .|:.|: ..|.|..:.            |...|.    
Mouse   520 AEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEW------------KKHAFG---- 568

  Fly   512 DQDTGGKSDFSRKKTIS--EQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHED 574
                |.|:.:.:|..:|  |||..||::..:::|:..:.:|.::|::||||||||||:||||.|.
Mouse   569 ----GNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 629

  Fly   575 GYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRES 639
            ||:.||.|||||||||||||||||||:|....||::|||.||||||||..|||||||||:||||.
Mouse   630 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 694

  Fly   640 LRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTF 704
            |.||:|..|:.|::||||||::.||||||||::.|.:|.|:||||||||:|:.||:.:|...|.|
Mouse   695 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIF 759

  Fly   705 TIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEI 769
            ||||||:||:::::|....||:::::...:|:|||...||:|:|:.|||:|:..||:|.||:..:
Mouse   760 TIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSL 824

  Fly   770 -DNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVY 833
             .:.|.|.|||:||.|||::|.:||..:..|.||.|:||||||||||:|||.||:|.|:.|.|||
Mouse   825 GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVY 889

  Fly   834 NPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVL 898
            |.:.|:|.|.:.|||||.|.||:|||||||||:.|||||:|.|:||:|...||||||||||:|||
Mouse   890 NSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVL 954

  Fly   899 LLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIV 963
            .||::|:.|||.|.|||.||.:.::.::.||:.|||||..|.||.|||:||||||:|..|:|||:
Mouse   955 SLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIM 1019

  Fly   964 ACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSST 1028
            :..:|||.|:|.|||||||.::|||||.::..||..:.||.:.|.||||.|.||..|:.|.:|:.
Mouse  1020 SVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNP 1084

  Fly  1029 WCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYV 1093
            ||.|:||..:::|:.:::|:|:..||.:..|.|:|||.....|:|.|||.:|..||:......|.
Mouse  1085 WCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYR 1149

  Fly  1094 NLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKESGR 1158
            .|......::||:|||:  ...|::||||||::|.||||:..|.:|..||.|..|.||.|.:..:
Mouse  1150 TLIDQQVVYIHPSSALF--NRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTK 1212

  Fly  1159 SGREKKKQAAEHLKEMEEQ 1177
            ..::||:|..|.|....|:
Mouse  1213 LSKQKKQQRLEPLYNRYEE 1231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp16NP_572947.1 HrpA 534..>1148 CDD:441249 332/614 (54%)
Dhx8NP_659080.2 GH2-like_DHX8 25..92 CDD:409668 10/45 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..289 64/152 (42%)
S1_DHX8_helicase 289..367 CDD:240189 15/95 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..396 6/34 (18%)
HrpA 580..>1211 CDD:441249 340/632 (54%)
DEAH box 709..712 2/2 (100%)

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