DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(1)G0007 and Dhx33

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_848144.3 Gene:Dhx33 / 216877 MGIID:2445102 Length:698 Species:Mus musculus


Alignment Length:665 Identity:280/665 - (42%)
Similarity:411/665 - (61%) Gaps:31/665 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 GGKSDFSRKKT--------------ISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQ 566
            ||.:...|::|              :..|||.||:|.:|.:||..:|.....:::||||||||||
Mouse    33 GGGAGGGRRQTPPLAQPSASPYREALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQ 97

  Fly   567 LTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMT 631
            :.|||:|.|.|::|:|..||||||||:|:|.|||||..|:||:.|||.:||||.|||.|.||::|
Mouse    98 IPQYLYEGGISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLT 162

  Fly   632 DGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHD-----LKLIVTSATMDS 691
            ||:||||::.|..|..||.:|:||||||::.||||||:::....||.:     ||:||.|||||.
Mouse   163 DGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDV 227

  Fly   692 SKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHL-TPNEGDMLIFMPGQEDI 755
            ..|:.:|...|...:.||..|:.:.::|...:||:.:|:....|:|. .|...|:|:|:.|||:|
Mouse   228 DLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEI 292

  Fly   756 EV---TCEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVD 817
            |.   ||..:...|.  |..|::.:||:|:.||...|.::||.:..|.||.:::|||||||:|:.
Mouse   293 EAMSKTCRDIARHLP--DGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITIT 355

  Fly   818 GIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLA 882
            ||.||:|:|..|.|.|||..|::.|.:..:|:..|.||:|||||...|..|||||:.:: ::...
Mouse   356 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFEK 419

  Fly   883 LTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTG---ALTTL 944
            :|||||||.|||:.:|.|.::.|.::|.|.||..|..|:|..::.||.:||||:|..   .||.:
Mouse   420 MTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPI 484

  Fly   945 GRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESD 1009
            ||:||.|||:|...:.::::.:..|:.|:|.|||:|||.|:.|.|..|.||...||:||...|.|
Mouse   485 GRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGD 549

  Fly  1010 HLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKC 1074
            |:|.||:|:.::....:..||.|:|::.|.|..|.|||.||::|..:.::.::|...|.:.||:|
Mouse   550 HITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMSSRGDMESVRRC 614

  Fly  1075 ICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVD 1139
            :..:.|...|.|:..|.|....|..|..:||:|.|:  ...|..|||..|:.|.|.||:....||
Mouse   615 MAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLF--HCKPACVVYTSLLYTNKCYMRDLCVVD 677

  Fly  1140 GYWLAELGPMFFSVK 1154
            ..||.|..|.:|..|
Mouse   678 AEWLYEAAPDYFRRK 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 100/190 (53%)
DEXDc 551..689 CDD:238005 81/142 (57%)
HELICc 722..870 CDD:238034 62/151 (41%)
HA2 932..1014 CDD:214852 38/84 (45%)
OB_NTP_bind 1048..1148 CDD:285018 33/99 (33%)
Dhx33NP_848144.3 Required for nucleolar location. /evidence=ECO:0000250|UniProtKB:Q9H6R0 1..71 10/37 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..50 4/16 (25%)
DEXDc 49..252 CDD:214692 100/202 (50%)
DEXDc 83..225 CDD:238005 81/141 (57%)
DEAH box 185..188 2/2 (100%)
Helicase_C 282..399 CDD:278689 51/118 (43%)
IBP39 409..>500 CDD:288304 39/91 (43%)
HA2, required for interaction with EIF3G and RPL26. /evidence=ECO:0000250|UniProtKB:Q9H6R0 462..553 39/90 (43%)
HA2 469..554 CDD:214852 38/84 (45%)
Critical for rDNA-binding 536..550 5/13 (38%)
OB_NTP_bind 588..688 CDD:285018 34/101 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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