DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(1)G0007 and Dhx57

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001157231.1 Gene:Dhx57 / 106794 MGIID:2147067 Length:1388 Species:Mus musculus


Alignment Length:1010 Identity:256/1010 - (25%)
Similarity:442/1010 - (43%) Gaps:237/1010 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 VVTLISVNDDFDEEALERVHLLVHHIIPPFLDGR-IVFTKQPEPVVPVKDPTSDMALLARKGSAL 449
            :|...|.|::.....  |:|      |..||.|: :.|.|..||||      ..:..|..:.|.:
Mouse   371 LVAFYSTNENLPLAC--RLH------ISEFLYGKALEFAKTSEPVV------YSLITLLEEESEI 421

  Fly   450 VR-------NY-----------REQKERRKAQKKHWELSGTKLGNIM-------GVQRPQDEDD- 488
            |:       .|           .|.:..:.|.:|....|.|.|.|.|       .::...|||: 
Mouse   422 VKLLTHTQHKYSVPPVNVPPVPSETRISKPAYRKPVVPSNTFLSNQMLEGERLSELEEDADEDEG 486

  Fly   489 ---MRFDKEK----DKADYRKDQKFADHMRDQDTGGKSDFSRKK------TISEQRRFLPVFASR 540
               :..:.|.    .|..|::..:.|..:..:::.....|..|:      .|.::|:.||.:..|
Mouse   487 PASIIVENESYVNLKKRSYKRYDRPAKSLFAENSKICRQFQMKQASRQFHAILQERQLLPAWEER 551

  Fly   541 QELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYS----KRGMIGCTQPRRVAAMSVAKRVSD 601
            :.:|.::.::.|::|.|.||.|||||:.|::.::..:    :...|.||||||::|:|||:||:.
Mouse   552 ETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAK 616

  Fly   602 EMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVL 666
            |...::|..|||.||.|...|..|.:.|.|.|:|||....|..|...:.||:||.|||:..:|.|
Mouse   617 ERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFL 681

  Fly   667 FGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKN----------- 720
            ..:|::||.:|..|::|:.|||:|:..|:.:|...|..|||||.||||..|.::           
Mouse   682 LLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQD 746

  Fly   721 ----------------------TCEDYVESAVKQALQVHLTPNE--------------------- 742
                                  |.::.||..::  |.:||...|                     
Mouse   747 GSPYMRSMKQIAKEKLKARHNRTAQEEVEEDLR--LSLHLQDEEESVKDTIPDQQLDFKQLLIRY 809

  Fly   743 ----------------------------------------GDMLIFMPGQEDIEVTCEVLEER-L 766
                                                    |.:|:|:||..:|::..|.|:.. |
Mouse   810 KGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSL 874

  Fly   767 AEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLK 831
            .....:....|.|::|.|.|:.|..:|.|...|:.|.:::|||||||:|:|.::||||||..|.|
Mouse   875 FNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEK 939

  Fly   832 VYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANT 896
            .|:...||::|:...:|||||.||.|||||...|..:.|:|...|..:||...:|||||..|...
Mouse   940 RYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQL 1004

  Fly   897 VLLLKSLGVVDLLQFH--------FMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPL 953
            .|.:|   ::::...|        .::||..|::..|..:|..||||.....||.||..:|..|:
Mouse  1005 CLRIK---ILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPV 1066

  Fly   954 DPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQ 1018
            |....:::::.....|....|.|.:.|:..|.|..|..:::||:..:.:|....||:|..|..|:
Mouse  1067 DVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYK 1131

  Fly  1019 QWRQNNYSS-----TWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGI------------ 1066
            .|:.:...|     .:|.::|:..:.::::..:::|..::::  ::..:..|:            
Mouse  1132 GWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLS--DIGFVKEGLRAKEIEKRAQGG 1194

  Fly  1067 ----------------DWDIVRKCICSAYFYQAARLK-GIGEYVNLRTGMP-------------- 1100
                            :..::...:|:|.:....::| ..|::....:|:.              
Mouse  1195 DGVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTSSGVVRLQPKSAELKFVTK 1259

  Fly  1101 ----CHLHPTSALYGLG--TTPDYVVYHELIMTAKEYMQCATAVDGYWLA-----------ELGP 1148
                .|:||:|..|.:.  .:| |::|||.|.|::.:::..:.|..|.|.           :.|.
Mouse  1260 NDGYVHIHPSSVNYQVRHFDSP-YLLYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRGA 1323

  Fly  1149 MFFSVKESGRSGREKKKQAAEHLKEME---EQMLK 1180
            ...|:.:..........|.||.:||:.   :|:|:
Mouse  1324 FVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQ 1358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 77/189 (41%)
DEXDc 551..689 CDD:238005 59/141 (42%)
HELICc 722..870 CDD:238034 59/209 (28%)
HA2 932..1014 CDD:214852 24/81 (30%)
OB_NTP_bind 1048..1148 CDD:285018 22/159 (14%)
Dhx57NP_001157231.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..107
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..154
UBA_DHX57 181..218 CDD:270502
RWD 246..419 CDD:368608 16/61 (26%)
HrpA 501..1298 CDD:224557 213/804 (26%)
DEVH box 669..672 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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