DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and dhx16

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001116881.3 Gene:dhx16 / 100127179 XenbaseID:XB-GENE-480525 Length:1033 Species:Xenopus tropicalis


Alignment Length:1197 Identity:427/1197 - (35%)
Similarity:637/1197 - (53%) Gaps:225/1197 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LEGTAGQETRGGLVIRKPKDAGA----GGGGGF------KVPQGSMLGLDKLAAKRRA----EKE 62
            |.|||.:.|....::.:.:|.||    ....||      |:|:.:.:.....||:|.|    ||.
 Frog    27 LVGTALRSTSATDLLVRLRDTGAIDVTEKVKGFLEQLWLKIPRKAPIERPARAAEREALAMQEKN 91

  Fly    63 RSERLISFKDSEFDDTGGGSSTPQANASGASSEFAFKKPDTKSFEKLRGQLREHKDDTPSHTGGV 127
            ||..|:  :|||                                       .|.|.|        
 Frog    92 RSYALL--EDSE---------------------------------------EEEKTD-------- 107

  Fly   128 SEKARERLREHIQRDRKRGPVSSTAAEGRDRDRDWDRDRRRDRDRDRDRDRDRRQHRERERD--- 189
             .|..:|.::|:::.||.        |..|.:.:..:..:....:....|.|.::...|.:|   
 Frog   108 -HKEEKRKKKHLRKRRKE--------ESSDSENENAQTTKVPSPQKTSEDEDEKEELARLKDLEE 163

  Fly   190 RHRSWDRDRGRDRDRDRSMSERSVHTPREPGTPGGSSGGISNSSWDDEDGEFGQRK---SDWD-- 249
            |....:|.:.||:::.|::.|||                      |.:..|..|::   ::.|  
 Frog   164 RDAFAERVKKRDKEKTRNIVERS----------------------DKKAYEEAQKRLKLAEEDRK 206

  Fly   250 --MPTPRRHGNKSGDWSVRSGGSRRNHGRQDDTVRPTPAHRYNQWAHGRKRSGATPWGEDPESLD 312
              :|..|:.             |||.:                                      
 Frog   207 KMIPELRKK-------------SRREY-------------------------------------- 220

  Fly   313 LWEEEQRRLDREWYNIDEGYDDENNPFGGPNSEYFRKREEQLEQKRTKRISAQQRQNNRDNELWE 377
            |.:.|:.:|:    :::....||...|..|  |.....:::||.||..|..|::.:...|.|..|
 Frog   221 LNKREKEKLE----DLEAEIADEEYLFVEP--ELTSVEQKELEYKRRVRDLAKEYKKAGDKERME 279

  Fly   378 RNRMLTSGVVTLISVNDDFDEEALERVHLLVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALL 442
            :              :|.:                  |:.......|.|:   ..::|.|:    
 Frog   280 K--------------HDRY------------------FMPEENRSKKIPD---RYEEPMSE---- 305

  Fly   443 ARKGSALVRNYREQKERRKAQKKHWELSGTKLGNIMGVQRPQDEDDMRFD---KEKDKADYRKDQ 504
                    ..:..::|:|:.:::|...:..:    .|.:...|.....:|   :|.:...:....
 Frog   306 --------ERFAPREEQRRWEEEHIGAASLR----FGAKDAHDHGKKEYDFVMEENEVIQFVSSA 358

  Fly   505 KFADHMRDQDTGGK--SDFSRKK-TISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQ 566
            :....:..::...:  |:..||| :|.|.||.||||..|.:||..|.::.::||.||||||||||
 Frog   359 QMKGTIDKEEENSEVLSESERKKLSIQEVRRSLPVFPYRSDLLQAISDHQILIIEGETGSGKTTQ 423

  Fly   567 LTQYLHEDGYSKRGM-IGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYM 630
            :.|||||.||:|.|: ||||||||||||||:.|||.||..:||.:|||:||||||||||||:|||
 Frog   424 IPQYLHEHGYTKNGLKIGCTQPRRVAAMSVSARVSQEMGVKLGNEVGYSIRFEDCTSERTVLKYM 488

  Fly   631 TDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFA 695
            |||:||||.|.:|:|.|||.||:||||||:|.|||||||:::|...|.|||::|.|||:::.:|:
 Frog   489 TDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDVLFGLIKDIARFRQDLKVLVASATLNTERFS 553

  Fly   696 TFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCE 760
            :||.:.|.|.||||.:|||:.::|....||:|:.|...||:|:|...||:|:|:.|||:||..||
 Frog   554 SFFDDAPVFRIPGRRYPVDIYYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIETCCE 618

  Fly   761 VLEERLAEIDNAPA-LSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVID 824
            :|:||...:.:..| :.:||||:.||||:|||||:.:..|.||.|:||||||||||:||||||||
 Frog   619 MLQERCRRLGSKIAEMLVLPIYANLPSDMQAKIFEPTPPGARKVVIATNIAETSLTIDGIIYVID 683

  Fly   825 SGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQ 889
            .|:||.|.||.|.||::|.:.|.|:|:||||:|||||...|:.:||||...||:|:...||||||
 Frog   684 PGFCKQKSYNARSGMESLIVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYKNEMEDTTVPEIQ 748

  Fly   890 RTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLD 954
            ||||.|.||||||||:.||:.|.||||||.:.::.:|.||:.||||:|.|.||.|||:|||.|:|
 Frog   749 RTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVD 813

  Fly   955 PPQCQMLIVACRMGCSAEVLIIVSMLSV-PSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQ 1018
            |...::::.:.:.|||.::|.|.:|||| .:||||||.:...||..|..|..|..||:..||||.
 Frog   814 PMLSKIILASEQYGCSEQILTIAAMLSVNNTIFYRPKDKLVHADTARANFTVPGGDHMVLLNVYT 878

  Fly  1019 QWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQA 1083
            ||.::.:|..||.|:||..:::|:.|:||:||:.:|.:..:.:.||..|...|||.|.:.|||..
 Frog   879 QWVESGHSLQWCYENFIQARSLRRARDVREQLEGLMGRIEIELTSCEGDSIPVRKAITAGYFYHT 943

  Fly  1084 ARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGP 1148
            |||...| |..::.....::||.|:|:  ...|.:|:||||:.|.||||:....:|..||.|:.|
 Frog   944 ARLTRSG-YKTVKQQQAVYIHPNSSLH--EEQPRWVIYHELVFTTKEYMRQIIEIDSTWLLEVAP 1005

  Fly  1149 MFFSVKE-SGRSGREKKKQAAEHLKEM 1174
            .::..:| ...:.::..::|.:..:|:
 Frog  1006 HYYKSRELEDPTSKKMPRKAGKSREEL 1032

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 120/186 (65%)
DEXDc 551..689 CDD:238005 97/138 (70%)
HELICc 722..870 CDD:238034 81/148 (55%)
HA2 932..1014 CDD:214852 39/82 (48%)
OB_NTP_bind 1048..1148 CDD:285018 37/99 (37%)
dhx16NP_001116881.3 PTZ00121 <88..381 CDD:173412 71/480 (15%)
HrpA 356..1005 CDD:224557 338/651 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X141
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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