DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(1)G0007 and dhx37

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:XP_005172500.1 Gene:dhx37 / 100009635 ZFINID:ZDB-GENE-030131-4505 Length:1153 Species:Danio rerio


Alignment Length:993 Identity:281/993 - (28%)
Similarity:426/993 - (42%) Gaps:263/993 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 NIDEGYDDENNPFGGPNSEYFRKREEQLEQKRTKRISAQQRQNNRDNELWERNRMLTSGVVTLIS 391
            :::||.|      ||.:|.   |........|.:|..|.:.:...::|:.|             |
Zfish   130 SVNEGQD------GGSSSV---KISSLSGANRKRRREADEEEEENESEMSE-------------S 172

  Fly   392 VNDDFDEEALERVHLLVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQ 456
            ..||.|.|                                    .||.:              |:
Zfish   173 SEDDDDSE------------------------------------ESDSS--------------EE 187

  Fly   457 KERRKAQKKHWELSGTKLGNIMGVQRPQDEDDMRFDKEKDKADYRKDQKFADHMRDQDTGGKSD- 520
            ::.:.:::||.|             ..|.:..::.:.:..:||.::::|       .:|..|.| 
Zfish   188 EKEKISEEKHTE-------------EQQQQQVLKEETKPKEADMKEEKK-------AETWTKEDC 232

  Fly   521 -------FSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGY-S 577
                   ..|...|.|.|..|||.|..|.::..::::..:::.||||||||||:.|:|:|.|: |
Zfish   233 KPAVFIPVERLPEIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFAS 297

  Fly   578 KRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRD 642
            ..|:||.|:||||||:|::.||:.||:...|. |.|.||:|...:|.|.||.||||:||:|..||
Zfish   298 SGGIIGVTEPRRVAAISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTKIKVMTDGVLLKEIQRD 361

  Fly   643 PELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRH----DLKLIVTSATMDSSKFA----TFFG 699
            ..|..||.||:|||||||:.||:|.|||..||..|:    .:|||:.|||:....|.    .|..
Zfish   362 FLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTENKRLFSS 426

  Fly   700 NVPTFTIPGRTFPVDVMFSKNT-CEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVL- 762
            ..|...:..|.|.|.|.|:|.| .:||.....::..::|.....|.:|:|:.||.::...|..| 
Zfish   427 PPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGILVFLTGQAEVHSVCRRLR 491

  Fly   763 ---------------------------------------------------EERLAEIDN----- 771
                                                               |:|.|.||.     
Zfish   492 KAFPYKPNREHTDMMETEEDLKKSKRAKKKNVSLPRINLDNYSALPVDEGDEDRQAGIDEDDGEG 556

  Fly   772 ---------------------APALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLT 815
                                 :..|.:||:||.|..:.|||:|:....|.|.||||||:||||||
Zfish   557 SDLELELGDHPDTDHEEKADPSIPLYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLT 621

  Fly   816 VDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDEL 880
            :.||.||:|.|..|.:.|:...|:.:.::..||||:||||:||||||.||..||||:...:.|..
Zfish   622 IPGIKYVVDCGRVKKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDFS 686

  Fly   881 LALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTG------ 939
            | .:..||.|..:.:.||.:|.|.:..::.|.|..||..:.::.:...|..||||:...      
Zfish   687 L-FSEAEITRRPVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLS 750

  Fly   940 ---------ALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFY---RPKGR 992
                     .::.|||.||.||:.|...:||.:..:.||...::.|||.::|..||.   ||.|.
Zfish   751 EMEKARLSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIFEDYDRPAGS 815

  Fly   993 EDEADGVREKFQRPES-----------------DHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAM 1040
            |:|  .|:...::..|                 |.:..|...........:..:|.|:.:..|||
Zfish   816 EEE--NVKMSGKKARSVQMRRLWAGQGASLLLGDLMVLLGAVGACEFAGLTPQFCEENGLRFKAM 878

  Fly  1041 RKVREVRQQL----------KDIMTQQNLS------------VISCGIDWDIVRKCICSAYFYQA 1083
            .::|.:|.||          .|:.....::            ::..|:...|.|:       .||
Zfish   879 LEIRRLRGQLTNAVNAVCADADVYVDNKMAPPTEAQVLCLRQIVLAGLGDHIARR-------VQA 936

  Fly  1084 ARL---KGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAE 1145
            ..|   |....|.......|..:||:|||:  .|.|::|||.|::.|.|.||:...||...|:.:
Zfish   937 EELLDPKWRNAYKTPLLDDPVFIHPSSALH--KTLPEFVVYQEIMETTKMYMRGVCAVQDDWIPK 999

  Fly  1146 LGPMF--FSVKESGRSGR 1161
            |.|.:  ||..|...:.|
Zfish  1000 LLPQYCHFSAPEESPAPR 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 89/194 (46%)
DEXDc 551..689 CDD:238005 75/142 (53%)
HELICc 722..870 CDD:238034 65/225 (29%)
HA2 932..1014 CDD:214852 30/116 (26%)
OB_NTP_bind 1048..1148 CDD:285018 31/124 (25%)
dhx37XP_005172500.1 HrpA 200..1007 CDD:224557 254/826 (31%)
DEXDc 272..412 CDD:238005 75/140 (54%)
HELICc 583..667 CDD:197757 43/83 (52%)
HA2 730..781 CDD:282288 13/50 (26%)
HA2 761..>813 CDD:214852 19/51 (37%)
OB_NTP_bind <918..1004 CDD:285018 29/94 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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