DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0007 and dhx32a

DIOPT Version :9

Sequence 1:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001189401.3 Gene:dhx32a / 100006246 ZFINID:ZDB-GENE-130613-6 Length:728 Species:Danio rerio


Alignment Length:765 Identity:225/765 - (29%)
Similarity:382/765 - (49%) Gaps:90/765 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 ELSGTKLGNIMGVQRPQDEDDMRFDKEKDKADYRKDQKFADHMRDQDTGGKSDFSRKKTISEQRR 532
            |||| :||                   |::.|.....:|.|.:......|....||...:.::|:
Zfish     6 ELSG-ELG-------------------KEEEDSENLFEFGDDLELNQFDGLPYSSRYYRLLQERK 50

  Fly   533 FLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHE---DGYSKRGMIGCTQPRRVAAMS 594
            .|||:..|.|.:.::..|.::|:.|.|.:||:||:.|:..|   ....:.|::.|:|.:|..|:.
Zfish    51 TLPVWKYRHEFMTLLENNQILIVSGTTKTGKSTQIPQWCAEFCLSAQYQHGVVVCSQIQRRQAVD 115

  Fly   595 VAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHER 659
            :|.||:||||..:|.::||:|..|.|.|..|:::|.||.|||||.:.||.|:.|..:::|:||||
Zfish   116 LALRVADEMDVNIGHEIGYSIPLETCCSNDTILRYCTDDILLREMMSDPLLEQYGVVLVDQAHER 180

  Fly   660 SLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCED 724
            ::|||||.|||||::.:|.:|:|:|.||........|.:|:||...:...: ..:|:.|.::..:
Zfish   181 TVSTDVLLGLLREVLLQRPELRLVVLSAPPTPETLLTHYGSVPRLHLEAPS-AGEVIHSSSSSSE 244

  Fly   725 YVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEER-------LAEIDNAPALS----IL 778
            ...||::.||:||.:...||:.:|:..::::...|.::.:.       |.|:...|..|    |.
Zfish   245 SFYSALRLALEVHRSREPGDVAVFLATEQEVVCACNIITKEASRMSVSLGELLAVPMCSGHAGIC 309

  Fly   779 PIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQ 843
            |..::.| .:..:||          |..:.:.:...:||.|.:|||:|..|..|||||:...:..
Zfish   310 PPVTESP-QMSRRIF----------VSCSQLEDLFWSVDSIAFVIDTGVEKRLVYNPRLRASSEV 363

  Fly   844 IYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDL 908
            |.|||:..|..|....|.|  |:.:.||.:   ..:|.|...|.|..:|:.:|.|.||.:....:
Zfish   364 IRPISKCQAEMRKQLTGST--GKCFCLYPE---DVQLPAEIHPRILESNITSTALFLKRMEAAGV 423

  Fly   909 LQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEV 973
            ...||::.|..:.::.:|.:|..|.|||:.|.|:.:|..|:|.||:|...:.|:.:|...|::|:
Zfish   424 THCHFINRPDPEGLMQALEELDYLAALDNDGNLSEMGIIMSELPLEPQMAKALLASCEFDCASEM 488

  Fly   974 LIIVSMLSVPSIFYRPK-GREDEADGVREKFQRPESDHLTYLNVYQQWRQNN---YSS--TWCNE 1032
            |.|.:||:.||.|..|. |...|......|||.||.||.|.:|:|..::::.   |.|  .||.:
Zfish   489 LTIAAMLTAPSCFIEPPVGMLTEVMRCHMKFQHPEGDHFTLINIYNTFKRSQREPYFSQEQWCEQ 553

  Fly  1033 HFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDI----VRKCICSAYFYQAAR-LKGIGEY 1092
            :::...|::....:|.||.|::.:..|.:.........    :::.:.:.||.|.|| :.|.|.|
Zfish   554 YYLCCAALQTADAIRSQLSDVLKRIELPISEPAFGTKTNALNIKRALLAGYFMQMARDVDGSGNY 618

  Fly  1093 VNLRTGMPCHLHPTSALYG-----LGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFF- 1151
            ..|........|..|| ||     || .|:::::||..:|... ::..|.:..:...::.|.:| 
Zfish   619 FMLLNKHVAQAHRLSA-YGAKAQKLG-LPEWLLFHEYSLTDNS-IRTLTHISPHAFVQMAPQYFF 680

  Fly  1152 -------------SVKESGRSGREKKKQAAEHLKEMEEQMLKAQHEMEER 1188
                         ::.:..|:|..|.|...|...|.:|.      |.:||
Zfish   681 CNLPPSESKEILQNILDRDRTGIPKAKTRPEPKTETQES------EAQER 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 73/188 (39%)
DEXDc 551..689 CDD:238005 62/140 (44%)
HELICc 722..870 CDD:238034 42/158 (27%)
HA2 932..1014 CDD:214852 34/82 (41%)
OB_NTP_bind 1048..1148 CDD:285018 25/109 (23%)
dhx32aNP_001189401.3 HrpA 14..>610 CDD:224557 188/612 (31%)
OB_NTP_bind 569..678 CDD:311586 26/111 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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