DRSC/TRiP Functional Genomics Resources

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Protein Alignment yl and DGCR2

DIOPT Version :9

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_005128.1 Gene:DGCR2 / 9993 HGNCID:2845 Length:550 Species:Homo sapiens


Alignment Length:396 Identity:85/396 - (21%)
Similarity:128/396 - (32%) Gaps:117/396 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NGRHVAISLLLLVGLCGGTAAGTPGSADTRCDAGQFQCRDG--GCILQAKMCDGRGDCKDSSDEL 122
            :|..:.:.||:|       ....|...:.||:.|||.||.|  .||.....|||...|:|.|||.
Human     7 SGAFLLLFLLVL-------TVTEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64

  Fly   123 DCDYRL--CRPPHWFPCAQP-------------HGACLAAELMCNG-IDNCPGG----EDELNC- 166
            :|....  .||.|......|             |...:|..:..:. :..||.|    |...:| 
Human    65 NCPEVTGEVRPHHGKEAVDPRQGRARGGDPSHFHAVNVAQPVRFSSFLGKCPTGWHHYEGTASCY 129

  Fly   167 -PVRPGFRFGDTAHRMRSCSK-------------YEFMCQQD--------------RTCIPIDFM 203
             ....|..:.|.|   ::|.:             ..|:..|:              :..:...::
Human   130 RVYLSGENYWDAA---QTCQRLNGSLATFSTDQELRFVLAQEWDQPERSFGWKDQRKLWVGYQYV 191

  Fly   204 CDGRPDCTDKSDEVAGCKQAEITCP-----------GEGHLCANGRC-----LRRKQWVCDGVDD 252
            ..||....:...|||....:|:..|           .:...||..:|     ||.........:.
Human   192 ITGRNRSLEGRWEVAFKGSSEVFLPPDPIFASAMSENDNVFCAQLQCFHFPTLRHHDLHSWHAES 256

  Fly   253 CGDGSDERGCLNLCEPQKGKFLCRNRETCLTLSE--VCDGHSDCSDGSDE--TDLCH-SKPD-CD 311
            |              .:|..|||:..:||:.:.:  |.:|......|.|.  :..|| .:|: |.
Human   257 C--------------YEKSSFLCKRSQTCVDIKDNVVDEGFYFTPKGDDPCLSCTCHGGEPEMCV 307

  Fly   312 AKKCALGAKCHMMPASGAECFCPKGFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCV--C 374
            |..|.....|........||        .||  .|.|.|.....|.:.|        |.|.|  |
Human   308 AALCERPQGCQQYRKDPKEC--------CKF--MCLDPDGNSLFDSMAS--------GMRLVVSC 354

  Fly   375 DAGYLL 380
            .:.:|:
Human   355 ISSFLI 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060 17/35 (49%)
LDLa 131..166 CDD:238060 9/52 (17%)
LDLa 184..216 CDD:238060 5/58 (9%)
LDLa 227..262 CDD:238060 7/50 (14%)
LDLa 271..302 CDD:238060 9/34 (26%)
FXa_inhibition 352..387 CDD:291342 7/31 (23%)
Ldl_recept_b 442..482 CDD:278487
LY 466..508 CDD:214531
Ldl_recept_b 529..569 CDD:278487
LY 553..595 CDD:214531
LY 596..637 CDD:214531
FXa_inhibition 669..700 CDD:291342
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060
LDLa 1074..1109 CDD:238060
LDLa 1118..1152 CDD:238060
LDLa 1157..1189 CDD:197566
LDLa 1198..1232 CDD:238060
LDLa 1243..1279 CDD:238060
LDLa 1283..1318 CDD:238060
LDLa 1340..1371 CDD:197566
FXa_inhibition 1388..1416 CDD:291342
EGF_CA 1418..1452 CDD:214542
DGCR2NP_005128.1 LDLa 30..66 CDD:238060 17/35 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..92 4/22 (18%)
CLECT_DGCR2_like 115..267 CDD:153069 28/168 (17%)
VWC 271..329 CDD:214564 14/65 (22%)
Atrophin-1 <428..537 CDD:331285
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..550
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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