Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006498522.1 | Gene: | Lrp1b / 94217 | MGIID: | 2151136 | Length: | 4668 | Species: | Mus musculus |
Alignment Length: | 1722 | Identity: | 482/1722 - (27%) |
---|---|---|---|
Similarity: | 717/1722 - (41%) | Gaps: | 329/1722 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 184 CSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDE-VAGC-KQAEITCPGEGHLCANGRCLRRKQWV 246
Fly 247 CDGVDDCGDGSDERGCLNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHS-KPDC 310
Fly 311 DAKKCALGAKCHMMPASGAECFCPKGFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCD 375
Fly 376 AGYLLDKDNRTCRAVVYGSKEQQPLLLYTTQMTIMGMHLREDNV-------RNHVYQVAGNLSKV 433
Fly 434 IGVAYDGSHIYW-----TNIQNEAESIVKANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDN 493
Fly 494 IMRHIAVCSNDGLNCAVLVTQDVHQPRSLAVWPQKGLMFWTDWGEKPMIGRASMDGSRSRPIVSD 558
Fly 559 NIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG-MLKHPYGLAIFEDQLYWSDWA 622
Fly 623 TKSVHACHKFSGKDHRILAKDRTIYAVHIYHPAKQPN-SPHGCE------NATCSHLCLLAEPEI 680
Fly 681 GGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQVLLEIEHTAFGRHQVSKSYTL------PCL 739
Fly 740 INEMVYNRIN----------GSLIIADNDQRLILEFQPESHESNVLVRSNLGNVSALAFDHLSRN 794
Fly 795 LYWA-DTERAVIEVLSL----QTRHRALIRFFPGQEVPIGLTVMPAEGYLY-VVLKAKR----HS 849
Fly 850 HIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDLGRISYSNYRVPHSQ-IFRGK- 912
Fly 913 LRRPYSLAMVHHDLFWNELGTPRIYWTHKSNMGPRKVIDIMEKDDPAAIMPYVPVATPNGIPLAA 977
Fly 978 SSPVGQE-SHPCQQQNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTC------VEALDC---E 1032
Fly 1033 FRCHSGECLTMNHRCNGRRDCVDNSDE--MNCDEEHRRKPKVLCSPNQFACHSGEQCVDKERRCD 1095
Fly 1096 NRKDCHDHSDE--QHCEKFDKSKKCHVHQHGCDNGKCVDSSLVCDGTNDCGDNSDELL-CEATSR 1157
Fly 1158 CEP-GMFQCGSGSCIAGSWECDGRIDCSDGSDEHDKCVHRSCPPDMQRCLLGQCLDRSLVCDGHN 1221
Fly 1222 DCGDKSDE--LNCGTDSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEADCGDVCS 1284
Fly 1285 IYE----FKCRSGRECIRREFRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLF 1345
Fly 1346 DCQD--GECVDLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPA-GAVCSCFDGY 1407
Fly 1408 RLDADQKSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQS-GATLLFSSFN 1471
Fly 1472 EVR--NLSEQPVMLNVAWSANDSRITGFDLAMHRQMGYFSAEDEGIVYQIDLQTKVIVRAL---- 1530
Fly 1531 --GLPAPTKLSVDWVTGNVYVLSGAQEIQACSFVGRMCGRIVHVKSPRHVKHLAVDGYHARIFYI 1593
Fly 1594 VIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYFVDQHMRTLERISYRLK 1658
Fly 1659 TGPMRRPEIMLQKSNALMHPSGLSV--YEN-------------NAFIVNLGSVEAVQ-------- 1700
Fly 1701 --CALYGSRIC-----------------HKIS-INVLNAQ--DIVVAGRSRQPQKASHPCA---- 1739
Fly 1740 HAHCHGLCLQADYGYECMCGNRLVAEGERCPH 1771 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | |
LDLa | 131..166 | CDD:238060 | |||
LDLa | 184..216 | CDD:238060 | 14/31 (45%) | ||
LDLa | 227..262 | CDD:238060 | 2/34 (6%) | ||
LDLa | 271..302 | CDD:238060 | 12/30 (40%) | ||
FXa_inhibition | 352..387 | CDD:291342 | 16/34 (47%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 9/44 (20%) | ||
LY | 466..508 | CDD:214531 | 16/41 (39%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 15/39 (38%) | ||
LY | 553..595 | CDD:214531 | 15/41 (37%) | ||
LY | 596..637 | CDD:214531 | 13/41 (32%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 11/30 (37%) | ||
LY | 774..815 | CDD:214531 | 16/45 (36%) | ||
LDLa | 1032..1062 | CDD:238060 | 13/31 (42%) | ||
LDLa | 1074..1109 | CDD:238060 | 13/36 (36%) | ||
LDLa | 1118..1152 | CDD:238060 | 14/34 (41%) | ||
LDLa | 1157..1189 | CDD:197566 | 16/32 (50%) | ||
LDLa | 1198..1232 | CDD:238060 | 17/35 (49%) | ||
LDLa | 1243..1279 | CDD:238060 | 12/35 (34%) | ||
LDLa | 1283..1318 | CDD:238060 | 15/38 (39%) | ||
LDLa | 1340..1371 | CDD:197566 | 9/32 (28%) | ||
FXa_inhibition | 1388..1416 | CDD:291342 | 11/28 (39%) | ||
EGF_CA | 1418..1452 | CDD:214542 | 9/33 (27%) | ||
Lrp1b | XP_006498522.1 | LDLa | 1167..1202 | CDD:238060 | 11/34 (32%) |
FXa_inhibition | 1207..1243 | CDD:373209 | 12/38 (32%) | ||
LY | 1311..1352 | CDD:214531 | 8/43 (19%) | ||
LY | 1358..1398 | CDD:214531 | 13/89 (15%) | ||
LY | 1402..1445 | CDD:214531 | 9/43 (21%) | ||
LY | <1457..1489 | CDD:214531 | 7/31 (23%) | ||
LY | 1635..1670 | CDD:214531 | |||
LY | 1672..1714 | CDD:214531 | |||
LY | 1716..1755 | CDD:214531 | |||
LY | <1766..1797 | CDD:214531 | |||
FXa_inhibition | 1869..1905 | CDD:373209 | |||
NHL | 1944..2169 | CDD:302697 | |||
NHL repeat | 1944..1983 | CDD:271320 | |||
LY | 1978..2018 | CDD:214531 | |||
NHL repeat | 1988..2025 | CDD:271320 | |||
NHL repeat | 2029..2070 | CDD:271320 | |||
Ldl_recept_b | 2039..2079 | CDD:278487 | |||
LY | 2064..2106 | CDD:214531 | |||
NHL repeat | 2073..2111 | CDD:271320 | |||
NHL repeat | 2120..2159 | CDD:271320 | |||
FXa_inhibition | 2178..2213 | CDD:373209 | |||
Ldl_recept_b | 2361..2402 | CDD:278487 | |||
LY | 2386..2428 | CDD:214531 | |||
LDLa | 2545..2574 | CDD:238060 | |||
LDLa | 2583..2617 | CDD:238060 | |||
LDLa | 2622..2656 | CDD:238060 | |||
LDLa | 2676..2705 | CDD:238060 | |||
LDLa | 2713..2747 | CDD:238060 | |||
LDLa | 2751..2784 | CDD:238060 | |||
LDLa | 2791..2824 | CDD:197566 | |||
LDLa | 2875..2908 | CDD:197566 | |||
LDLa | 2922..2956 | CDD:238060 | |||
LDLa | 63..95 | CDD:238060 | 14/31 (45%) | ||
LDLa | 107..140 | CDD:197566 | 14/73 (19%) | ||
FXa_inhibition | 194..224 | CDD:373209 | 15/29 (52%) | ||
LY | 314..346 | CDD:214531 | 14/31 (45%) | ||
LY | 350..392 | CDD:214531 | 15/41 (37%) | ||
LY | 394..435 | CDD:214531 | 15/40 (38%) | ||
FXa_inhibition | 514..547 | CDD:373209 | 11/33 (33%) | ||
LY | 580..621 | CDD:214531 | 7/42 (17%) | ||
LY | 622..661 | CDD:214531 | 13/38 (34%) | ||
LY | 668..717 | CDD:214531 | 11/50 (22%) | ||
LY | 718..760 | CDD:214531 | 11/43 (26%) | ||
FXa_inhibition | 829..864 | CDD:373209 | 11/36 (31%) | ||
LDLa | 917..950 | CDD:238060 | 12/33 (36%) | ||
LDLa | 957..989 | CDD:197566 | 12/31 (39%) | ||
LDLa | 1000..1033 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1037..1070 | CDD:238060 | 17/32 (53%) | ||
LDLa | 1084..1119 | CDD:238060 | 12/35 (34%) | ||
Ldl_recept_a | 1131..1162 | CDD:365841 | 15/30 (50%) | ||
cEGF | 2979..3002 | CDD:372248 | |||
EGF_CA | 2999..3033 | CDD:214542 | |||
LY | 3066..3110 | CDD:214531 | |||
LY | 3111..3149 | CDD:214531 | |||
LY | 3154..3195 | CDD:214531 | |||
LY | 3198..3237 | CDD:214531 | |||
FXa_inhibition | 3308..3344 | CDD:373209 | |||
LDLa | 3348..3379 | CDD:197566 | |||
LDLa | 3388..3422 | CDD:238060 | |||
LDLa | 3427..3462 | CDD:238060 | |||
LDLa | 3467..3502 | CDD:238060 | |||
LDLa | 3507..3541 | CDD:238060 | |||
LDLa | 3546..3580 | CDD:238060 | |||
LDLa | 3584..3618 | CDD:238060 | |||
LDLa | 3625..3659 | CDD:238060 | |||
LDLa | 3663..3698 | CDD:238060 | |||
LDLa | 3705..3737 | CDD:238060 | |||
LDLa | 3746..3782 | CDD:238060 | |||
LDLa | 3793..3827 | CDD:238060 | |||
EGF_CA | 3875..3909 | CDD:214542 | |||
NHL | 3972..4204 | CDD:302697 | |||
NHL repeat | 4002..4039 | CDD:271320 | |||
NHL repeat | 4060..4098 | CDD:271320 | |||
Ldl_recept_b | 4070..4110 | CDD:393440 | |||
LY | 4094..4133 | CDD:214531 | |||
NHL repeat | 4148..4186 | CDD:271320 | |||
EGF_CA | 4281..4315 | CDD:238011 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |