Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001181916.1 | Gene: | lrp2a / 568184 | ZFINID: | ZDB-GENE-050119-2 | Length: | 4673 | Species: | Danio rerio |
Alignment Length: | 2103 | Identity: | 581/2103 - (27%) |
---|---|---|---|
Similarity: | 903/2103 - (42%) | Gaps: | 377/2103 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 68 LLLLVGLCGGTAAGTPGSADTRCDAGQFQCRDGGCILQAKMCDGRGDCKDSSDELDCDYRLCR-- 130
Fly 131 -----------PPHW---------------------------FPCAQPHGACLAAELMCNGIDNC 157
Fly 158 PGGEDELNC--------------------------PVRPGFRFGDTAHRMRSCSKYEFMCQQDRT 196
Fly 197 CIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCANGRCLRRKQWVCDGVDDCGDGSDERG 261
Fly 262 CLNL---CEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCA-LGAK-- 320
Fly 321 CHMMPASGAECFCPKGFRLAKFEDK-CEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDN 384
Fly 385 RTCRAVVYGSKEQQPLLLYTTQMTIMGMHLREDNVRNHVYQV---AGNLSKVIGV--AYDGSHIY 444
Fly 445 WTN-IQNEAESIVKANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNC 508
Fly 509 AVLVTQDVHQPRSLAVWPQKGLMFWTDW----GEKPMIGRASMDGSRSRPIVSDNIEWPNGIALD 569
Fly 570 MHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG--MLKHPYGLAIFEDQLYWSDWATKSVHACHKF 632
Fly 633 SGKDHRILAK-DRTIYAVHIYHPAKQP--NSPHGCENATCSHLCLLA-EPEIG--GHSCACPDGM 691
Fly 692 RLAPDHRRCMLMEKRQRLFIGLGQVLLEIEHTAFGRHQVSKSYT-LPCLINEMVYNRINGSLIIA 755
Fly 756 DNDQRLILEFQPESHESNVLVRSNLGNVSALAFDHLSRNLYWADTERAVIEVLSLQTR-HRALIR 819
Fly 820 FFPGQEVPIGLTVMPAEGYLY--------VVLKAKRHSHIDKIPLSGKGEQVH-VFEDDLGDDDI 875
Fly 876 KLVTDYETQTIFWSDSDLGRISYSNY----RVPHSQIFRGKLRRPYSLAMVHHDLFWNELGTPRI 936
Fly 937 YWTHKSNMGPRKVIDIMEKDDPAAIMPYVPVATPNGIPLAASSPVGQESHPCQQQ---NGGCSHI 998
Fly 999 CVGEGPYHSICLCPAGFVYRDAGNRTCVE-------ALDC---EFRCHSGECLTMNHRCNGRRDC 1053
Fly 1054 VDNSDEMNCDEEHRRKPKVLCSPNQFACHSGEQCVDKERRCDNRKDCHDHSDEQHCEKFDKSKKC 1118
Fly 1119 HVHQHGCDNGKCVDSSLVCDGTNDCGDNSDELLCEATSRCEPGMFQCGSGSCIAGSWECDGRIDC 1183
Fly 1184 SDGSDEHDKCVHRSCPPDMQRCLLG-QCLDRSLVCDGHNDCGDKSDELNCGTDSSTMNISC-AED 1246
Fly 1247 QYQCTSNLKICLPSTVRCNGTTECPRGEDE--ADCGDVCSIYEFKCRSGRECIRREFRCDGQKDC 1309
Fly 1310 GDGSDELSCELEKGHHNQSQIQPWSTSSR--SCRPHLFDCQDGECVDLSRVCNNFPDCTNGHDEG 1372
Fly 1373 PKC------ATACRSASGRQVCQHKCRATPAGAVCSCFDGYRLDADQKSCLDIDECQEQQPCAQL 1431
Fly 1432 CENTLGGYQCQCHADFMLRQDRVSCKSLQSG---ATLLFSSFNEVRN---LSEQPVMLNVAWSAN 1490
Fly 1491 DSRITGFDLAMHR-------QMGYFSAEDEGIVYQIDLQTKVIVRALGLPAPTKLSVDWVTGNVY 1548
Fly 1549 ------------VLSGA-QEIQACSFVGRMCGRIVHVKSPRHVKHLAVDGYHARIFYIVIRTEGY 1600
Fly 1601 GQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYFVDQHMRTLERISYRLKTGPMRRP 1665
Fly 1666 EIMLQKSNALMHPSGLSVYENNAFIVNLGSVEAVQCALYGSRICHKISINVLNAQDIVVAGRSRQ 1730
Fly 1731 P------QKASHPCAHAHCHGLCLQADYG---YECMC--GNRLVAEGERC--------------- 1769
Fly 1770 -------PHGSGNE--VAVLGAVNSLELEHEH--------EQNGHFHWLMA------LFVLAA-- 1809
Fly 1810 GSLIAGLGYMYYQYRQRGHTDLNINMHFQNP------LATLGG----TKAFLEHERAEAGVGFTT 1864
Fly 1865 ETGTVSSRGS---NDTFTTTSATSSFAAQQFSVPNALQRLLRPRQSASGDPMAQELLLESPSRES 1926
Fly 1927 KLH-ALDGGGA--GGDGDGGRGV 1946 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | 16/33 (48%) |
LDLa | 131..166 | CDD:238060 | 13/61 (21%) | ||
LDLa | 184..216 | CDD:238060 | 13/31 (42%) | ||
LDLa | 227..262 | CDD:238060 | 16/34 (47%) | ||
LDLa | 271..302 | CDD:238060 | 11/30 (37%) | ||
FXa_inhibition | 352..387 | CDD:291342 | 13/34 (38%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 15/40 (38%) | ||
LY | 466..508 | CDD:214531 | 13/41 (32%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 17/43 (40%) | ||
LY | 553..595 | CDD:214531 | 15/41 (37%) | ||
LY | 596..637 | CDD:214531 | 14/42 (33%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 11/33 (33%) | ||
LY | 774..815 | CDD:214531 | 14/41 (34%) | ||
LDLa | 1032..1062 | CDD:238060 | 13/29 (45%) | ||
LDLa | 1074..1109 | CDD:238060 | 15/34 (44%) | ||
LDLa | 1118..1152 | CDD:238060 | 15/33 (45%) | ||
LDLa | 1157..1189 | CDD:197566 | 15/31 (48%) | ||
LDLa | 1198..1232 | CDD:238060 | 13/34 (38%) | ||
LDLa | 1243..1279 | CDD:238060 | 14/38 (37%) | ||
LDLa | 1283..1318 | CDD:238060 | 16/34 (47%) | ||
LDLa | 1340..1371 | CDD:197566 | 15/30 (50%) | ||
FXa_inhibition | 1388..1416 | CDD:291342 | 12/27 (44%) | ||
EGF_CA | 1418..1452 | CDD:214542 | 13/33 (39%) | ||
lrp2a | NP_001181916.1 | LDLa | 23..57 | CDD:238060 | 16/33 (48%) |
Ldl_recept_a | 61..96 | CDD:278486 | 4/34 (12%) | ||
LDLa | 103..137 | CDD:238060 | 10/35 (29%) | ||
LDLa | 143..174 | CDD:238060 | 4/33 (12%) | ||
LDLa | 178..212 | CDD:238060 | 15/35 (43%) | ||
LDLa | 217..251 | CDD:238060 | 16/34 (47%) | ||
LDLa | 258..292 | CDD:238060 | 13/35 (37%) | ||
NHL | <429..610 | CDD:302697 | 66/184 (36%) | ||
NHL repeat | 461..496 | CDD:271320 | 12/34 (35%) | ||
LY | 495..540 | CDD:214531 | 18/45 (40%) | ||
LY | 543..583 | CDD:214531 | 15/39 (38%) | ||
NHL repeat | 550..591 | CDD:271320 | 18/40 (45%) | ||
FXa_inhibition | 655..696 | CDD:291342 | 12/40 (30%) | ||
LY | 768..804 | CDD:214531 | 14/35 (40%) | ||
Ldl_recept_b | 830..870 | CDD:278487 | 7/51 (14%) | ||
LY | 854..896 | CDD:214531 | 9/42 (21%) | ||
FXa_inhibition | 973..1005 | CDD:291342 | 11/32 (34%) | ||
LDLa | 1018..1052 | CDD:238060 | 14/33 (42%) | ||
LDLa | 1059..1093 | CDD:238060 | 15/34 (44%) | ||
LDLa | 1101..1135 | CDD:238060 | 15/33 (45%) | ||
LDLa | 1141..1175 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1179..1214 | CDD:238060 | 13/34 (38%) | ||
LDLa | 1222..1255 | CDD:197566 | 11/33 (33%) | ||
LDLa | 1264..1298 | CDD:238060 | 16/34 (47%) | ||
LDLa | 1304..1337 | CDD:197566 | 17/38 (45%) | ||
FXa_inhibition | 1351..1386 | CDD:291342 | 13/36 (36%) | ||
EGF_CA | 1388..1418 | CDD:214542 | 12/29 (41%) | ||
LY | 1459..1498 | CDD:214531 | 7/45 (16%) | ||
LY | 1500..1541 | CDD:214531 | 10/40 (25%) | ||
LY | 1543..1585 | CDD:214531 | 12/58 (21%) | ||
LY | 1589..1630 | CDD:214531 | 10/43 (23%) | ||
FXa_inhibition | 1709..1740 | CDD:291342 | 11/35 (31%) | ||
NHL | <1799..1978 | CDD:302697 | 34/175 (19%) | ||
NHL repeat | 1823..1866 | CDD:271320 | 8/53 (15%) | ||
NHL repeat | 1872..1913 | CDD:271320 | 7/40 (18%) | ||
Ldl_recept_b | 1883..1927 | CDD:278487 | 6/51 (12%) | ||
LY | 1912..1953 | CDD:214531 | 10/48 (21%) | ||
NHL repeat | 1920..1946 | CDD:271320 | 6/33 (18%) | ||
FXa_inhibition | 2022..2058 | CDD:291342 | |||
NHL | <2125..2295 | CDD:302697 | |||
NHL repeat | 2149..2186 | CDD:271320 | |||
LY | 2182..2225 | CDD:214531 | |||
NHL repeat | 2189..2226 | CDD:271320 | |||
LY | 2228..2267 | CDD:214531 | |||
NHL repeat | 2235..2276 | CDD:271320 | |||
FXa_inhibition | 2346..2382 | CDD:291342 | |||
LY | 2461..2500 | CDD:214531 | |||
Ldl_recept_b | 2519..2559 | CDD:278487 | |||
LY | 2545..2585 | CDD:214531 | |||
Ldl_recept_b | 2603..2642 | CDD:278487 | |||
FXa_inhibition | 2655..2691 | CDD:291342 | |||
LDLa | 2759..2793 | CDD:238060 | |||
LDLa | 2798..2835 | CDD:238060 | |||
LDLa | 2838..2872 | CDD:294076 | |||
LDLa | 2882..2913 | CDD:238060 | |||
LDLa | 2923..2955 | CDD:197566 | |||
LDLa | 2965..3002 | CDD:197566 | |||
LDLa | 3011..3045 | CDD:238060 | |||
LDLa | 3050..3083 | CDD:238060 | |||
LDLa | 3093..3127 | CDD:238060 | |||
cEGF | 3150..3173 | CDD:289433 | |||
vWFA | <3165..3206 | CDD:294047 | |||
LY | 3237..3279 | CDD:214531 | |||
LY | 3282..3321 | CDD:214531 | |||
Ldl_recept_b | 3350..3390 | CDD:278487 | |||
LY | 3376..3416 | CDD:214531 | |||
LY | 3417..3458 | CDD:214531 | |||
FXa_inhibition | 3486..>3514 | CDD:291342 | |||
LDLa | 3529..3561 | CDD:238060 | |||
LDLa | 3570..3602 | CDD:238060 | |||
LDLa | 3611..3643 | CDD:238060 | |||
LDLa | 3651..3683 | CDD:197566 | |||
LDLa | 3699..3731 | CDD:238060 | |||
LDLa | 3738..3771 | CDD:238060 | |||
LDLa | 3776..3810 | CDD:238060 | |||
LDLa | 3815..3849 | CDD:238060 | |||
LDLa | 3859..3891 | CDD:238060 | |||
LDLa | 3902..3932 | CDD:197566 | |||
LDLa | 3945..3979 | CDD:238060 | |||
EGF_CA | 4024..4055 | CDD:214542 | |||
LY | 4158..4193 | CDD:214531 | |||
Ldl_recept_b | 4214..4254 | CDD:278487 | |||
LY | 4238..4281 | CDD:214531 | |||
FXa_inhibition | 4356..>4377 | CDD:291342 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |