Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021325646.1 | Gene: | lrp1ab / 565797 | ZFINID: | ZDB-GENE-030131-7126 | Length: | 4562 | Species: | Danio rerio |
Alignment Length: | 1823 | Identity: | 499/1823 - (27%) |
---|---|---|---|
Similarity: | 744/1823 - (40%) | Gaps: | 513/1823 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 90 CDAGQFQCRDGGCILQAKMCDGRGDCKDSSDE-LDCDYRLCRPPHWFPCAQPHGACLAAELMCNG 153
Fly 154 IDNCPGGEDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVA 218
Fly 219 GCKQAEITC-PGEGHLCANGRCLRRKQWVCDGVDDCGDGSDERGCLNLCEPQKGK-----FLCRN 277
Fly 278 RETCLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCALGAK---CHMMPAS---GAECFCPKG 336
Fly 337 FRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRT-CRAVVYGSKEQQPL 400
Fly 401 LLYTTQMTIMGMHLREDNVRNHVYQ-VAGNLSKVIGVAYDGSH--IYWTNIQNEAESIVKANGDG 462
Fly 463 SNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQDVHQPRSLAVWPQ 527
Fly 528 KGLMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDG 592
Fly 593 TGRRTVLDGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRTIYA---VHIYHP 654
Fly 655 AKQPN-SPHGC--ENATCSHLCLLAEPEIGGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQV 716
Fly 717 LLEIEHTAFGRHQVSKSYTLPCLINEMVYNRINGSLIIADNDQRLILEFQPESHESNVLVRSNLG 781
Fly 782 NVSALAFDHLSRNLYW-ADTERAVIEVLSLQTRHRALIRFFPGQEVPIGLTVMPAEGYLYVVLKA 845
Fly 846 KRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDLGRISYSNYRVPHSQIFR 910
Fly 911 GKLRRPYSLAMVHHDLFWNELGTPRIYWTHKSNMGPRKVIDIMEKDDPAAIMPYVPVATPNGIPL 975
Fly 976 AASSPVGQESHPCQQQ--NGGC---SHICVGEGPYHSICLCPAGFVYRDAGNRTCVEALDCEFRC 1035
Fly 1036 -HSGECLTMNHRCNGRRDCVDNSDEMNCDEEHRRKPKVLCSPNQFACHSGEQCVDKERRCDNRKD 1099
Fly 1100 CHDHSDE-QHCEKFDKSKKCHVHQHGC-DNGKCVDSSLVCDGTNDCGDNSDELLCEATSR-CEPG 1161
Fly 1162 MFQCGSGSCIAGSWECDGRIDCSDGSDEHDKCVHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDK 1226
Fly 1227 SDELNCGTDSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEA-------------- 1277
Fly 1278 -------------------DCGD-------VCSIYE------FKCRSGRECIRREFRCDGQKDCG 1310
Fly 1311 DGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDCQDGECVDLSRVCNNFPDCTN-GHDE-GP 1373
Fly 1374 KCATA---CRSASGRQVC----QHKCRATPAGAVCSCFDGYRLDADQKSCLDIDECQEQQPCAQL 1431
Fly 1432 CENTLGGYQCQCHADFMLRQDRV--SCKS--LQSGATLLF-SSFNEVRNLSEQPVMLNVAWSA-- 1489
Fly 1490 ---NDSRITGFDLAM---------------------------------HRQMGYFSAEDEGIVYQ 1518
Fly 1519 IDLQTKVIVRALGLPAPTKLSVDWVTGNVY-VLSGAQEIQACSFVGRMCGRIVHVKSPRHVKHL- 1581
Fly 1582 --AVDGYHARIFYIVIRTE-------GYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQ 1637
Fly 1638 QLLYFVDQHMRTLERISYRLKTGPMRRPEIMLQK-SNALMHPSGLSVYENNAFIVNLGSVEAVQC 1701
Fly 1702 ALYGSRICHKISINVLNAQDIVVAGRSRQPQKASHPCAHAHCHGLCLQADYGYECMCGNRLVAEG 1766
Fly 1767 ERC 1769 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | 14/34 (41%) |
LDLa | 131..166 | CDD:238060 | 12/34 (35%) | ||
LDLa | 184..216 | CDD:238060 | 16/31 (52%) | ||
LDLa | 227..262 | CDD:238060 | 20/35 (57%) | ||
LDLa | 271..302 | CDD:238060 | 13/35 (37%) | ||
FXa_inhibition | 352..387 | CDD:291342 | 13/35 (37%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 13/41 (32%) | ||
LY | 466..508 | CDD:214531 | 14/41 (34%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 19/39 (49%) | ||
LY | 553..595 | CDD:214531 | 17/41 (41%) | ||
LY | 596..637 | CDD:214531 | 16/40 (40%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 15/30 (50%) | ||
LY | 774..815 | CDD:214531 | 4/41 (10%) | ||
LDLa | 1032..1062 | CDD:238060 | 11/30 (37%) | ||
LDLa | 1074..1109 | CDD:238060 | 15/35 (43%) | ||
LDLa | 1118..1152 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1157..1189 | CDD:197566 | 15/32 (47%) | ||
LDLa | 1198..1232 | CDD:238060 | 13/33 (39%) | ||
LDLa | 1243..1279 | CDD:238060 | 14/68 (21%) | ||
LDLa | 1283..1318 | CDD:238060 | 16/40 (40%) | ||
LDLa | 1340..1371 | CDD:197566 | 11/31 (35%) | ||
FXa_inhibition | 1388..1416 | CDD:291342 | 6/31 (19%) | ||
EGF_CA | 1418..1452 | CDD:214542 | 14/33 (42%) | ||
lrp1ab | XP_021325646.1 | LDLa | 36..69 | CDD:197566 | |
LDLa | 81..114 | CDD:197566 | |||
FXa_inhibition | 170..198 | CDD:317114 | |||
NHL | <292..479 | CDD:302697 | |||
NHL repeat | 292..325 | CDD:271320 | |||
LY | 323..365 | CDD:214531 | |||
NHL repeat | 332..368 | CDD:271320 | |||
LY | 368..408 | CDD:214531 | |||
NHL repeat | 373..413 | CDD:271320 | |||
NHL repeat | 421..467 | CDD:271320 | |||
FXa_inhibition | 494..526 | CDD:317114 | |||
LY | 558..600 | CDD:214531 | |||
LY | 602..640 | CDD:214531 | |||
LY | 647..695 | CDD:214531 | |||
LY | <707..740 | CDD:214531 | |||
FXa_inhibition | 811..846 | CDD:317114 | |||
LDLa | 857..889 | CDD:197566 | |||
LDLa | 899..932 | CDD:238060 | |||
LDLa | 940..971 | CDD:238060 | |||
LDLa | 982..1015 | CDD:238060 | |||
LDLa | 1019..1052 | CDD:238060 | |||
LDLa | 1066..1101 | CDD:238060 | |||
LDLa | 1110..1144 | CDD:238060 | |||
LDLa | 1149..1185 | CDD:238060 | |||
FXa_inhibition | 1188..1224 | CDD:317114 | |||
LY | 1339..1381 | CDD:214531 | |||
LY | 1383..1426 | CDD:214531 | |||
LY | 1437..1470 | CDD:214531 | |||
LY | 1479..1515 | CDD:214531 | |||
LY | 1616..1652 | CDD:214531 | |||
LY | 1653..1696 | CDD:214531 | |||
LY | 1700..1739 | CDD:214531 | |||
LY | 1739..1780 | CDD:214531 | |||
FXa_inhibition | 1853..1889 | CDD:317114 | |||
LY | 1919..1959 | CDD:214531 | |||
LY | 1962..2002 | CDD:214531 | |||
LY | 2003..2046 | CDD:214531 | |||
LY | 2048..2090 | CDD:214531 | |||
FXa_inhibition | 2162..2197 | CDD:317114 | |||
SGL | 2236..2464 | CDD:331563 | |||
Ldl_recept_b | 2346..2387 | CDD:278487 | |||
LY | 2372..2413 | CDD:214531 | |||
FXa_inhibition | 2483..2518 | CDD:317114 | |||
LDLa | 2523..2559 | CDD:294076 | |||
LDLa | 2567..2601 | CDD:238060 | |||
LDLa | 2606..2640 | CDD:238060 | |||
LDLa | <2667..2689 | CDD:238060 | |||
LDLa | 2697..2731 | CDD:238060 | |||
LDLa | 2738..2769 | CDD:197566 | 12/30 (40%) | ||
LDLa | 2777..2810 | CDD:197566 | 11/34 (32%) | ||
LDLa | 2821..2853 | CDD:197566 | 16/32 (50%) | ||
Ldl_recept_a | 2861..2895 | CDD:278486 | 20/34 (59%) | ||
LDLa | 2908..2942 | CDD:238060 | 13/41 (32%) | ||
cEGF | 2965..2988 | CDD:315355 | 9/22 (41%) | ||
EGF_CA | 2985..3019 | CDD:214542 | 14/34 (41%) | ||
LY | 3052..3096 | CDD:214531 | 10/43 (23%) | ||
LY | 3097..3139 | CDD:214531 | 14/41 (34%) | ||
LY | 3141..3183 | CDD:214531 | 19/41 (46%) | ||
LY | 3184..3226 | CDD:214531 | 17/41 (41%) | ||
LY | 3227..3267 | CDD:214531 | 16/39 (41%) | ||
FXa_inhibition | 3297..3333 | CDD:317114 | 17/37 (46%) | ||
LDLa | 3337..3368 | CDD:238060 | 12/209 (6%) | ||
LDLa | 3377..3411 | CDD:238060 | 10/42 (24%) | ||
LDLa | 3416..3451 | CDD:238060 | 12/34 (35%) | ||
LDLa | 3455..3488 | CDD:197566 | 13/32 (41%) | ||
LDLa | 3496..3529 | CDD:197566 | 16/32 (50%) | ||
LDLa | 3539..3573 | CDD:238060 | 16/34 (47%) | ||
LDLa | 3578..3612 | CDD:238060 | 13/33 (39%) | ||
LDLa | 3616..3650 | CDD:238060 | 14/35 (40%) | ||
LDLa | 3658..3690 | CDD:238060 | 4/31 (13%) | ||
LDLa | 3699..3735 | CDD:238060 | 15/35 (43%) | ||
LDLa | 3741..3776 | CDD:238060 | 13/34 (38%) | ||
EGF_CA | 3825..3855 | CDD:214542 | 14/33 (42%) | ||
LY | 3963..3999 | CDD:214531 | 14/47 (30%) | ||
Ldl_recept_b | 4020..4060 | CDD:278487 | 9/40 (23%) | ||
LY | 4044..4085 | CDD:214531 | 10/42 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.710 |