DRSC/TRiP Functional Genomics Resources

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Protein Alignment yl and Corin

DIOPT Version :10

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_058565.2 Gene:Corin / 53419 MGIID:1349451 Length:1113 Species:Mus musculus


Alignment Length:821 Identity:195/821 - (23%)
Similarity:294/821 - (35%) Gaps:273/821 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   978 SSPVGQESHPCQQQNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTCVEALDCEFRCHSGECLT 1042
            :|.|.:.....||::|..|             ||..|.                .|.|.||.|:.
Mouse   317 NSSVRKSCFSLQQEHGKQS-------------LCGGGE----------------SFLCTSGLCVP 352

  Fly  1043 MNHRCNGRRDCVDNSDEMNCDEEHRRKPKVLCSPNQFACHSGEQCVDKERRCDNRKDCHDHSDEQ 1107
            ...:|||..||.|.|||.:|:          ||.:.|.|.:| :|:.....||...||.|.||||
Mouse   353 KKLQCNGYNDCDDWSDEAHCN----------CSKDLFHCGTG-KCLHYSLLCDGYDDCGDLSDEQ 406

  Fly  1108 HCEKFDKSKKCHV-HQHGCDNGKCVDSSLVCDGTNDCGDNSDELLCEATSRCEPGMFQCGSGSCI 1171
            :|:       |:: .:|.|.:|:|:.:..||||.:||.|.|||:.|...|:   |:.:|.||.||
Mouse   407 NCD-------CNLTKEHRCGDGRCIAAEWVCDGDHDCVDKSDEVNCSCHSQ---GLVECRSGQCI 461

  Fly  1172 AGSWECDGRIDCSDGSDEHDKC--VHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDKSDELNCG- 1233
            ..:::|||..||.||||| :.|  ....||...|.||...|::.   |.|.:.|...|...||. 
Mouse   462 PSTFQCDGDEDCKDGSDE-ENCSDSQTPCPEGEQGCLGSSCVES---CAGSSLCDSDSSLSNCSQ 522

  Fly  1234 ----TDSSTMNISCAEDQY-------------------------------------------QCT 1251
                |....||:......|                                           :|.
Mouse   523 CEPITLELCMNLPYNHTHYPNYLGHRTQKEASISWESSLFPALVQTNCYKYLMFFACTILVPKCD 587

  Fly  1252 SNL--------KICLPSTVRCNGT-----------TEC----PRGEDEADC----GDV--CSIYE 1287
            .|.        .:|..|..||...           |:|    ....|...|    .||  ||...
Mouse   588 VNTGQRIPPCRLLCEHSKERCESVLGIVGLQWPEDTDCNQFPEESSDNQTCLLPNEDVEECSPSH 652

  Fly  1288 FKCRSGRECIRREFRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPH-LFDCQ-DG 1350
            ||||||| |:....|||||.||.|.|||.:|                    .|:.. |::|. :.
Mouse   653 FKCRSGR-CVLGSRRCDGQADCDDDSDEENC--------------------GCKERALWECPFNK 696

  Fly  1351 ECVDLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPAGAVCS------------- 1402
            :|:..:.:|:.||||.:..||  |..:.|:. :..:...|:|  .|....|.             
Mouse   697 QCLKHTLICDGFPDCPDSMDE--KNCSFCQD-NELECANHEC--VPRDLWCDGWVDCSDSSDEWG 756

  Fly  1403 -------------------------CFDGYRLDADQKSC--LDIDE--------CQEQQPCAQLC 1432
                                     |.||:|....|.:|  :.:.|        .||.|...:|.
Mouse   757 CVTLSKNGNSSSLLTVHKSAKEHHVCADGWRETLSQLACKQMGLGEPSVTKLIPGQEGQQWLRLY 821

  Fly  1433 EN--TLGG----------YQCQCHADFMLRQDRVSC---------KSLQSGATLLFSSFNEVRNL 1476
            .|  .|.|          :.|...::..|...:..|         |.:..|.|.....:....:|
Mouse   822 PNWENLNGSTLQELLVYRHSCPSRSEISLLCSKQDCGRRPAARMNKRILGGRTSRPGRWPWQCSL 886

  Fly  1477 SEQP-------VMLNVAWSANDSRITGFDLAMHRQMGYFSAEDEGIVYQID--------LQTKVI 1526
            ..:|       |::...|...         ..|...|...|:...:|:.|:        :||:.:
Mouse   887 QSEPSGHICGCVLIAKKWVLT---------VAHCFEGREDADVWKVVFGINNLDHPSGFMQTRFV 942

  Fly  1527 VRALGLPAPTKLSVDWVTGNVYVLSGAQEIQACSFVGRMCGRIVHVKSPRHVKHLAVDGYHARIF 1591
            ...|..|..::..||:   ::.|:..:.:|...|:|..:|     :.||.  ::|..|.|    .
Mouse   943 KTILLHPRYSRAVVDY---DISVVELSDDINETSYVRPVC-----LPSPE--EYLEPDTY----C 993

  Fly  1592 YIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALT 1632
            ||.    |:|...:::.....:|..|.:.|::.:|:....|
Mouse   994 YIT----GWGHMGNKMPFKLQEGEVRIIPLEQCQSYFDMKT 1030

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060
LDLa 131..166 CDD:238060
LDLa 184..216 CDD:238060
LDLa 227..262 CDD:238060
LDLa 271..302 CDD:238060
FXa_inhibition 352..387 CDD:464251
Ldl_recept_b 442..483 CDD:459654
LY 466..508 CDD:214531
Ldl_recept_b 529..569 CDD:459654
LY 553..595 CDD:214531
LY 596..637 CDD:214531
FXa_inhibition 669..700 CDD:464251
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060 14/29 (48%)
LDLa 1074..1109 CDD:238060 15/34 (44%)
LDLa 1118..1152 CDD:238060 15/34 (44%)
LDLa 1157..1189 CDD:197566 14/31 (45%)
LDLa 1198..1232 CDD:238060 10/33 (30%)
LDLa 1243..1279 CDD:238060 10/101 (10%)
LDLa 1283..1318 CDD:238060 21/34 (62%)
LDLa 1340..1371 CDD:197566 9/32 (28%)
FXa_inhibition 1388..1416 CDD:464251 9/65 (14%)
EGF_CA 1418..1452 CDD:214542 10/53 (19%)
CorinNP_058565.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..202
CRD_corin_1 202..331 CDD:143554 4/13 (31%)
LDLa 337..372 CDD:238060 16/50 (32%)
LDLa 374..408 CDD:238060 15/34 (44%)
Ldl_recept_a 415..445 CDD:395011 14/29 (48%)
LDLa 455..482 CDD:238060 15/27 (56%)
CRD_corin_2 522..643 CDD:143579 14/120 (12%)
Ldl_recept_a 648..682 CDD:395011 21/34 (62%)
LDLa <695..720 CDD:238060 9/26 (35%)
LDLa 723..757 CDD:238060 5/36 (14%)
SR 758..853 CDD:214555 16/94 (17%)
Tryp_SPc 869..1100 CDD:238113 36/189 (19%)
Blue background indicates that the domain is not in the aligned region.

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