Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005157607.1 | Gene: | sorl1 / 497306 | ZFINID: | ZDB-GENE-050208-22 | Length: | 2213 | Species: | Danio rerio |
Alignment Length: | 1370 | Identity: | 311/1370 - (22%) |
---|---|---|---|
Similarity: | 446/1370 - (32%) | Gaps: | 555/1370 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 253 CGDG-------SDER--GCLNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHSKP 308
Fly 309 DCDAKKCALGAKCHMMPASGAECFCPK-------GFRLAKFEDKCEDVDECKEQDDL-------- 358
Fly 359 --CSQGCE-NTSGGYRCV----CDAGYL---LDKDNRTCRAVVYGSKEQQPLLLYTTQMTIMGMH 413
Fly 414 LREDNVRNHVYQVAGNLSKVIGVA-----------YDGSHIYWTNIQNEAESIVKANGDGSNAEI 467
Fly 468 LLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDG-LNCAVLVTQDVHQPRSLAVWPQKGLM 531
Fly 532 FWTDWGEKPM-IGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGR 595
Fly 596 RTVLDGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRT-IYAVHIYHPAKQPN 659
Fly 660 SPHGCENATCSHLCLLAEPEIGG-HSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQVLLEIEHT 723
Fly 724 AFGRHQVSKSYTLPCLINEMVYNRINGSLIIADNDQRLILEFQPESHESNVLVRSNLGNVSALAF 788
Fly 789 DHLSRNLYWADTERAVIEVLSLQTRHRALIRFFPGQEVPIGLTVMPAEGYLYVVLKAKRHSHIDK 853
Fly 854 IPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDLGRISYSNYRVPHSQIFRGKLRRPYS 918
Fly 919 LAMVHHDLFWNELGTPRIYWTHKSNMGPRKVIDIMEKDDPAAIMPYVPVATPNGIPLAASSPVGQ 983
Fly 984 ESHPCQQQNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTCVE----ALDCEFRCHSGECLTMN 1044
Fly 1045 HRCNGRRDCVDNSDEMNCDEEHRRKPKVLCSPN-QFACHSGEQCVDKERRCDNRKDCHDHSDEQH 1108
Fly 1109 CEKFDKSKKCHVHQHGCDNGKCVDSSLVCDGTNDCGDNSDELLCEATSR-CEPGMFQCGSGSCIA 1172
Fly 1173 GSWECDGRIDCSDGSDE------HDKC--------------VH----RSCP--PDMQRC------ 1205
Fly 1206 -------LLGQCLDRSLVCDGHNDCGDKSDE----LNCGTDSSTMNISCAEDQYQCTSNLKICLP 1259
Fly 1260 STVRCNGTTECPRGEDEADCGD------VCSIYEFKCRSGRECIRREFRCDGQKDCGDGSDELSC 1318
Fly 1319 ELEKGHHNQSQIQPWSTSSRSCRPHLFDCQDGECVDLSRVCNNFPDCTNGHDEGPKCATACRSA- 1382
Fly 1383 -------SGRQVC---QHKCRATPAGAVCSCFDGYRLDADQKSCLD-IDE--CQEQQPCAQLCEN 1434
Fly 1435 ----------TLGGYQCQCHADFMLRQDRVSCKSLQSGATLLFSSFNEVRNLSEQPV--MLNVAW 1487
Fly 1488 SANDS 1492 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | |
LDLa | 131..166 | CDD:238060 | |||
LDLa | 184..216 | CDD:238060 | |||
LDLa | 227..262 | CDD:238060 | 6/17 (35%) | ||
LDLa | 271..302 | CDD:238060 | 6/30 (20%) | ||
FXa_inhibition | 352..387 | CDD:291342 | 13/52 (25%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 10/39 (26%) | ||
LY | 466..508 | CDD:214531 | 12/42 (29%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 21/40 (53%) | ||
LY | 553..595 | CDD:214531 | 13/41 (32%) | ||
LY | 596..637 | CDD:214531 | 13/40 (33%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 12/31 (39%) | ||
LY | 774..815 | CDD:214531 | 0/40 (0%) | ||
LDLa | 1032..1062 | CDD:238060 | 11/29 (38%) | ||
LDLa | 1074..1109 | CDD:238060 | 14/35 (40%) | ||
LDLa | 1118..1152 | CDD:238060 | 14/33 (42%) | ||
LDLa | 1157..1189 | CDD:197566 | 17/32 (53%) | ||
LDLa | 1198..1232 | CDD:238060 | 19/52 (37%) | ||
LDLa | 1243..1279 | CDD:238060 | 11/35 (31%) | ||
LDLa | 1283..1318 | CDD:238060 | 16/34 (47%) | ||
LDLa | 1340..1371 | CDD:197566 | 10/30 (33%) | ||
FXa_inhibition | 1388..1416 | CDD:291342 | 6/30 (20%) | ||
EGF_CA | 1418..1452 | CDD:214542 | 12/46 (26%) | ||
sorl1 | XP_005157607.1 | VPS10 | 130..754 | CDD:214740 | 38/168 (23%) |
Sortilin_C | 589..754 | CDD:292523 | 38/168 (23%) | ||
LY | 781..822 | CDD:214531 | 6/41 (15%) | ||
LY | 825..864 | CDD:214531 | 9/38 (24%) | ||
LY | 868..912 | CDD:214531 | 19/43 (44%) | ||
LY | 916..954 | CDD:214531 | 13/39 (33%) | ||
LDLa | 1079..1113 | CDD:238060 | 12/33 (36%) | ||
LDLa | 1118..1154 | CDD:238060 | 14/35 (40%) | ||
LDLa | 1159..1193 | CDD:238060 | 14/33 (42%) | ||
LDLa | 1242..1273 | CDD:238060 | 5/30 (17%) | ||
LDLa | 1282..1310 | CDD:197566 | 12/27 (44%) | ||
LDLa | 1327..1361 | CDD:238060 | 11/35 (31%) | ||
LDLa | 1376..1405 | CDD:238060 | 15/29 (52%) | ||
LDLa | 1421..1455 | CDD:238060 | 12/34 (35%) | ||
LDLa | 1474..1509 | CDD:238060 | 11/39 (28%) | ||
LDLa | 1522..1551 | CDD:238060 | 5/28 (18%) | ||
FN3 | 1559..>1630 | CDD:238020 | 5/12 (42%) | ||
FN3 | 1653..1743 | CDD:238020 | |||
FN3 | 1750..1827 | CDD:238020 | |||
FN3 | 1931..2007 | CDD:238020 | |||
FN3 | 2022..2097 | CDD:214495 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |