DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yl and fbln5

DIOPT Version :9

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_001005979.1 Gene:fbln5 / 449806 ZFINID:ZDB-GENE-041010-54 Length:477 Species:Danio rerio


Alignment Length:466 Identity:100/466 - (21%)
Similarity:154/466 - (33%) Gaps:132/466 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 CRDGGCI-LQAKMCDGRGDCKDSSDELDCDYR--------LCRP------------PHWFPCA-- 138
            |.||... .:::.|....:|:...|....|.|        ||.|            |..:|.|  
Zfish    35 CSDGFTFDRRSRQCMDIDECRTLPDPCRGDMRCVNQNGGYLCMPRGLYSQSYGRNSPLPYPEASY 99

  Fly   139 --QPHGACLAAELMCNGIDNCPGGEDELNCPVRP------------------------GFRFG-- 175
              :|:.            |...|..:..:.||.|                        |:.||  
Zfish   100 PEEPYP------------DRSLGYSETYSAPVAPVAPGPGPGPGPSYPIVSRTTPCLLGYTFGAD 152

  Fly   176 DTAHRMRSCSKYEFMCQQDRTCIPI--DFMCDGRPDCTDKSDEVAG------------CKQAEIT 226
            .|...:..|......|...:.||..  .:.|    .||:....|.|            |:|....
Zfish   153 GTCVDVDECEAESHQCNPTQVCINTAGGYTC----SCTEGYWLVGGQCQDIDECRYGYCQQLCAN 213

  Fly   227 CPGE-GHLCANGRCLRRKQWVCDGVDDCGDGSDERGCLNLCEPQKGKFLCRNRETCLTLSEVCDG 290
            .||. ...|:.|..|......|..||:|.......||||    ..|.|:|               
Zfish   214 VPGSYSCSCSPGFLLNTDARTCQDVDECVTDPCSHGCLN----TYGSFMC--------------- 259

  Fly   291 HSDCSDG----SDETDLCHSKPDCDAKKCALGAKCHMMPASGAECFCPKGFRLAKFED--KCEDV 349
              .|.:|    :|:| .|:...:|..........|...|.| ..|.||.|:.:  :||  .|||:
Zfish   260 --TCDEGFELAADDT-TCNDLDECSFSDFLCQHTCVNAPGS-FSCACPSGYYV--YEDGRSCEDL 318

  Fly   350 DECKEQDDLCS--QGCENTSGGYRCV----CDAGYLLDKDNR-TCRAVVYGSKEQQPLLLYTTQM 407
            :||:..::.|:  |.|.|..|||.|:    ||..|:...||: .|.|.....:::...:||....
Zfish   319 NECESGNNTCTTEQVCFNFQGGYTCLNPLRCDPPYIELSDNQCMCSAENPACRDRPFTVLYRHMD 383

  Fly   408 TIMGMHLREDNVRNHVYQVAGNLSKVIGVAYDGS-HIYWTNIQNEAESIVKANGDGSNAEILLTS 471
            ...|..:..|     ::|:...      ..|.|: :|:.....||............:|.::|..
Zfish   384 LSSGRSVPAD-----IFQMQAT------TRYPGAFYIFQIKSGNEGREFYMRQTSNMSATLVLAR 437

  Fly   472 GLDAPEDLAVD 482
            .:..|:.:.:|
Zfish   438 PIKGPKTVVLD 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060 6/27 (22%)
LDLa 131..166 CDD:238060 7/50 (14%)
LDLa 184..216 CDD:238060 7/33 (21%)
LDLa 227..262 CDD:238060 9/35 (26%)
LDLa 271..302 CDD:238060 6/34 (18%)
FXa_inhibition 352..387 CDD:291342 14/41 (34%)
Ldl_recept_b 442..482 CDD:278487 6/39 (15%)
LY 466..508 CDD:214531 3/17 (18%)
Ldl_recept_b 529..569 CDD:278487
LY 553..595 CDD:214531
LY 596..637 CDD:214531
FXa_inhibition 669..700 CDD:291342
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060
LDLa 1074..1109 CDD:238060
LDLa 1118..1152 CDD:238060
LDLa 1157..1189 CDD:197566
LDLa 1198..1232 CDD:238060
LDLa 1243..1279 CDD:238060
LDLa 1283..1318 CDD:238060
LDLa 1340..1371 CDD:197566
FXa_inhibition 1388..1416 CDD:291342
EGF_CA 1418..1452 CDD:214542
fbln5NP_001005979.1 vWFA <155..191 CDD:294047 7/39 (18%)
vWFA <191..234 CDD:294047 9/42 (21%)
vWFA <235..273 CDD:294047 15/59 (25%)
vWFA <274..314 CDD:294047 11/42 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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